Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS15215
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
2,861,616 | + | SGL_RS15205 | 0.70 | +0.3 | |
2,861,626 | + | SGL_RS15205 | 0.71 | -0.6 | |
2,861,626 | + | SGL_RS15205 | 0.71 | -0.2 | |
2,861,730 | + | SGL_RS15205 | 0.85 | -0.4 | |
2,862,572 | + | -0.1 | |||
2,862,706 | - | SGL_RS15215 | 0.31 | +1.8 | |
2,862,890 | + | SGL_RS15215 | 0.70 | +0.2 | |
2,863,148 | - | +1.6 | |||
2,863,161 | - | +0.6 | |||
2,863,176 | + | +0.4 | |||
2,863,190 | + | +1.0 | |||
2,863,190 | + | -0.1 | |||
2,863,237 | - | +1.1 | |||
2,863,390 | - | +0.6 | |||
2,863,519 | - | SGL_RS15220 | 0.11 | +0.7 | |
2,863,526 | + | SGL_RS15220 | 0.11 | +0.8 | |
2,863,544 | - | SGL_RS15220 | 0.12 | +0.7 | |
2,863,688 | - | SGL_RS15220 | 0.16 | +1.3 | |
2,863,859 | - | SGL_RS15220 | 0.20 | +0.9 | |
2,863,859 | - | SGL_RS15220 | 0.20 | +0.6 | |
2,863,887 | + | SGL_RS15220 | 0.21 | -0.1 | |
2,864,004 | + | SGL_RS15220 | 0.24 | +0.7 | |
2,864,018 | - | SGL_RS15220 | 0.24 | +0.5 |
Or see this region's nucleotide sequence