Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15070 and SGL_RS15075 are separated by 25 nucleotides SGL_RS15075 and SGL_RS19055 are separated by 94 nucleotides SGL_RS19055 and SGL_RS15080 are separated by 96 nucleotides SGL_RS15080 and SGL_RS15085 are separated by 265 nucleotides
SGL_RS15070: SGL_RS15070 - GDP-L-fucose synthase, at 2,828,140 to 2,829,072
_RS15070
SGL_RS15075: SGL_RS15075 - S9 family peptidase, at 2,829,098 to 2,831,011
_RS15075
SGL_RS19055: SGL_RS19055 - 50S ribosomal protein L33, at 2,831,106 to 2,831,303
_RS19055
SGL_RS15080: SGL_RS15080 - 30S ribosomal protein S18, at 2,831,400 to 2,831,615
_RS15080
SGL_RS15085: SGL_RS15085 - alanine racemase, at 2,831,881 to 2,833,083
_RS15085
Position (kb)
2829
2830
2831
2832 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2829.188 kb on - strand at 2829.188 kb on - strand at 2829.205 kb on - strand at 2829.407 kb on - strand, within SGL_RS15075 at 2829.631 kb on + strand, within SGL_RS15075 at 2829.644 kb on - strand, within SGL_RS15075 at 2829.668 kb on - strand, within SGL_RS15075 at 2829.858 kb on - strand, within SGL_RS15075 at 2829.885 kb on - strand, within SGL_RS15075 at 2829.939 kb on + strand, within SGL_RS15075 at 2829.939 kb on + strand, within SGL_RS15075 at 2829.990 kb on + strand, within SGL_RS15075 at 2830.048 kb on + strand, within SGL_RS15075 at 2830.056 kb on - strand, within SGL_RS15075 at 2830.206 kb on + strand, within SGL_RS15075 at 2830.214 kb on - strand, within SGL_RS15075 at 2830.219 kb on - strand, within SGL_RS15075 at 2830.328 kb on + strand, within SGL_RS15075 at 2830.342 kb on - strand, within SGL_RS15075 at 2830.405 kb on - strand, within SGL_RS15075 at 2830.476 kb on - strand, within SGL_RS15075 at 2830.492 kb on - strand, within SGL_RS15075 at 2830.532 kb on + strand, within SGL_RS15075 at 2830.538 kb on + strand, within SGL_RS15075 at 2830.590 kb on + strand, within SGL_RS15075 at 2830.590 kb on + strand, within SGL_RS15075 at 2830.590 kb on + strand, within SGL_RS15075 at 2830.613 kb on + strand, within SGL_RS15075 at 2830.648 kb on - strand, within SGL_RS15075 at 2830.667 kb on + strand, within SGL_RS15075 at 2830.786 kb on - strand, within SGL_RS15075 at 2830.791 kb on - strand, within SGL_RS15075 at 2830.871 kb on + strand at 2830.989 kb on + strand at 2830.989 kb on + strand at 2830.997 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 2,829,188 - -2.9 2,829,188 - -1.1 2,829,205 - -1.1 2,829,407 - SGL_RS15075 0.16 -1.5 2,829,631 + SGL_RS15075 0.28 -1.6 2,829,644 - SGL_RS15075 0.29 -0.6 2,829,668 - SGL_RS15075 0.30 -1.8 2,829,858 - SGL_RS15075 0.40 -2.5 2,829,885 - SGL_RS15075 0.41 -0.6 2,829,939 + SGL_RS15075 0.44 -1.3 2,829,939 + SGL_RS15075 0.44 -0.6 2,829,990 + SGL_RS15075 0.47 -1.5 2,830,048 + SGL_RS15075 0.50 -0.5 2,830,056 - SGL_RS15075 0.50 -1.1 2,830,206 + SGL_RS15075 0.58 -1.0 2,830,214 - SGL_RS15075 0.58 -1.2 2,830,219 - SGL_RS15075 0.59 -1.7 2,830,328 + SGL_RS15075 0.64 -1.4 2,830,342 - SGL_RS15075 0.65 -1.3 2,830,405 - SGL_RS15075 0.68 -1.6 2,830,476 - SGL_RS15075 0.72 -2.1 2,830,492 - SGL_RS15075 0.73 -1.8 2,830,532 + SGL_RS15075 0.75 -1.8 2,830,538 + SGL_RS15075 0.75 -0.9 2,830,590 + SGL_RS15075 0.78 -1.3 2,830,590 + SGL_RS15075 0.78 -1.6 2,830,590 + SGL_RS15075 0.78 -1.2 2,830,613 + SGL_RS15075 0.79 -1.3 2,830,648 - SGL_RS15075 0.81 -2.7 2,830,667 + SGL_RS15075 0.82 -0.8 2,830,786 - SGL_RS15075 0.88 -2.1 2,830,791 - SGL_RS15075 0.88 -0.9 2,830,871 + -1.1 2,830,989 + +0.7 2,830,989 + -0.1 2,830,997 - -0.8
Or see this region's nucleotide sequence