Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS14865
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
2,792,228 | - | SGL_RS14860 | 0.35 | -2.0 | |
2,792,501 | - | SGL_RS14860 | 0.58 | -2.0 | |
2,792,542 | + | SGL_RS14860 | 0.61 | -1.8 | |
2,792,555 | - | SGL_RS14860 | 0.62 | -2.0 | |
2,792,560 | - | SGL_RS14860 | 0.63 | -1.5 | |
2,792,560 | - | SGL_RS14860 | 0.63 | -2.5 | |
2,792,560 | - | SGL_RS14860 | 0.63 | -3.0 | |
2,792,643 | + | SGL_RS14860 | 0.70 | -2.2 | |
2,792,806 | + | SGL_RS14860 | 0.83 | -2.4 | |
2,792,932 | + | -3.1 | |||
2,792,946 | + | -3.6 | |||
2,793,026 | - | +0.6 | |||
2,793,065 | + | +0.7 | |||
2,793,177 | - | +1.8 | |||
2,793,231 | + | +2.1 | |||
2,793,481 | - | SGL_RS14865 | 0.42 | +2.2 | |
2,793,850 | - | +1.9 | |||
2,794,007 | + | SGL_RS14870 | 0.18 | +0.2 | |
2,794,061 | + | SGL_RS14870 | 0.30 | +0.3 | |
2,794,069 | - | SGL_RS14870 | 0.31 | -0.1 | |
2,794,069 | - | SGL_RS14870 | 0.31 | +0.1 | |
2,794,121 | + | SGL_RS14870 | 0.43 | +0.4 | |
2,794,415 | + | +1.6 | |||
2,794,468 | - | -0.4 | |||
2,794,532 | + | SGL_RS14875 | 0.22 | +0.5 | |
2,794,581 | - | SGL_RS14875 | 0.33 | -0.3 | |
2,794,640 | + | SGL_RS14875 | 0.46 | -0.6 | |
2,794,789 | + | SGL_RS14875 | 0.80 | +0.3 |
Or see this region's nucleotide sequence