Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14465 and SGL_RS14470 are separated by 116 nucleotides SGL_RS14470 and SGL_RS14475 are separated by 213 nucleotides SGL_RS14475 and SGL_RS14480 are separated by 125 nucleotides
SGL_RS14465: SGL_RS14465 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 2,698,258 to 2,699,145
_RS14465
SGL_RS14470: SGL_RS14470 - hypothetical protein, at 2,699,262 to 2,699,855
_RS14470
SGL_RS14475: SGL_RS14475 - alpha/beta hydrolase, at 2,700,069 to 2,700,818
_RS14475
SGL_RS14480: SGL_RS14480 - uroporphyrinogen-III C-methyltransferase, at 2,700,944 to 2,701,735
_RS14480
Position (kb)
2700
2701 Strain fitness (log2 ratio)
-1
0
1 at 2699.156 kb on + strand at 2699.172 kb on - strand at 2699.214 kb on + strand at 2699.286 kb on - strand at 2699.287 kb on + strand at 2699.295 kb on - strand at 2699.350 kb on - strand, within SGL_RS14470 at 2699.357 kb on + strand, within SGL_RS14470 at 2699.630 kb on + strand, within SGL_RS14470 at 2699.633 kb on - strand, within SGL_RS14470 at 2699.742 kb on - strand, within SGL_RS14470 at 2700.103 kb on + strand at 2700.189 kb on - strand, within SGL_RS14475 at 2700.241 kb on + strand, within SGL_RS14475 at 2700.596 kb on + strand, within SGL_RS14475 at 2700.596 kb on + strand, within SGL_RS14475 at 2700.807 kb on - strand at 2700.956 kb on + strand at 2701.126 kb on - strand, within SGL_RS14480 at 2701.729 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 2,699,156 + -0.1 2,699,172 - -0.0 2,699,214 + -0.4 2,699,286 - -0.2 2,699,287 + +0.7 2,699,295 - +0.2 2,699,350 - SGL_RS14470 0.15 +0.5 2,699,357 + SGL_RS14470 0.16 +0.6 2,699,630 + SGL_RS14470 0.62 -0.5 2,699,633 - SGL_RS14470 0.62 -0.1 2,699,742 - SGL_RS14470 0.81 +0.2 2,700,103 + +0.2 2,700,189 - SGL_RS14475 0.16 -1.0 2,700,241 + SGL_RS14475 0.23 -0.4 2,700,596 + SGL_RS14475 0.70 +0.2 2,700,596 + SGL_RS14475 0.70 -1.0 2,700,807 - -0.5 2,700,956 + -0.0 2,701,126 - SGL_RS14480 0.23 -1.5 2,701,729 + -0.5
Or see this region's nucleotide sequence