Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14435 and SGL_RS14440 are separated by 0 nucleotides SGL_RS14440 and SGL_RS14445 are separated by 5 nucleotides SGL_RS14445 and SGL_RS19635 are separated by 474 nucleotides SGL_RS19635 and SGL_RS14450 are separated by 349 nucleotides
SGL_RS14435: SGL_RS14435 - cobalt transporter CbiM, at 2,693,080 to 2,693,724
_RS14435
SGL_RS14440: SGL_RS14440 - carboxypeptidase-like regulatory domain-containing protein, at 2,693,725 to 2,694,255
_RS14440
SGL_RS14445: SGL_RS14445 - hypothetical protein, at 2,694,261 to 2,695,145
_RS14445
SGL_RS19635: SGL_RS19635 - hypothetical protein, at 2,695,620 to 2,695,775
_RS19635
SGL_RS14450: SGL_RS14450 - hypothetical protein, at 2,696,125 to 2,696,403
_RS14450
Position (kb)
2694
2695
2696 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2693.437 kb on + strand, within SGL_RS14435 at 2693.506 kb on - strand, within SGL_RS14435 at 2693.737 kb on - strand at 2693.737 kb on - strand at 2693.920 kb on - strand, within SGL_RS14440 at 2693.953 kb on - strand, within SGL_RS14440 at 2694.412 kb on - strand, within SGL_RS14445 at 2694.423 kb on + strand, within SGL_RS14445 at 2694.628 kb on + strand, within SGL_RS14445 at 2694.678 kb on + strand, within SGL_RS14445 at 2694.678 kb on + strand, within SGL_RS14445 at 2694.686 kb on - strand, within SGL_RS14445 at 2694.892 kb on + strand, within SGL_RS14445 at 2695.003 kb on - strand, within SGL_RS14445 at 2695.183 kb on - strand at 2695.315 kb on - strand at 2695.397 kb on - strand at 2695.429 kb on - strand at 2695.704 kb on - strand, within SGL_RS19635 at 2696.049 kb on + strand at 2696.091 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 2,693,437 + SGL_RS14435 0.55 -2.5 2,693,506 - SGL_RS14435 0.66 -1.0 2,693,737 - -0.9 2,693,737 - -2.0 2,693,920 - SGL_RS14440 0.37 -1.8 2,693,953 - SGL_RS14440 0.43 +0.4 2,694,412 - SGL_RS14445 0.17 -3.8 2,694,423 + SGL_RS14445 0.18 +0.2 2,694,628 + SGL_RS14445 0.41 -0.4 2,694,678 + SGL_RS14445 0.47 -1.8 2,694,678 + SGL_RS14445 0.47 -0.8 2,694,686 - SGL_RS14445 0.48 -2.8 2,694,892 + SGL_RS14445 0.71 -1.8 2,695,003 - SGL_RS14445 0.84 -1.8 2,695,183 - -5.2 2,695,315 - +0.3 2,695,397 - +2.4 2,695,429 - +0.4 2,695,704 - SGL_RS19635 0.54 +0.2 2,696,049 + +0.2 2,696,091 - +0.1
Or see this region's nucleotide sequence