Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS14045
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
2,612,281 | - | SGL_RS14040 | 0.78 | +0.2 | |
2,612,301 | + | SGL_RS14040 | 0.79 | +1.0 | |
2,612,309 | - | SGL_RS14040 | 0.80 | +0.1 | |
2,612,457 | - | SGL_RS14040 | 0.87 | +0.7 | |
2,612,558 | + | +0.5 | |||
2,612,795 | - | +1.5 | |||
2,612,940 | - | +0.5 | |||
2,613,057 | - | SGL_RS14045 | 0.36 | +1.3 | |
2,613,069 | + | SGL_RS14045 | 0.39 | +1.6 | |
2,613,216 | + | SGL_RS14045 | 0.75 | +0.9 | |
2,613,224 | - | SGL_RS14045 | 0.77 | +1.6 | |
2,613,224 | - | SGL_RS14045 | 0.77 | +0.4 | |
2,613,315 | - | +2.0 | |||
2,613,688 | - | -1.1 | |||
2,613,811 | + | SGL_RS14055 | 0.14 | -0.4 | |
2,613,935 | + | SGL_RS14055 | 0.33 | +0.0 | |
2,613,936 | + | SGL_RS14055 | 0.33 | +0.1 | |
2,613,959 | - | SGL_RS14055 | 0.37 | +0.3 | |
2,614,010 | - | SGL_RS14055 | 0.45 | -0.5 | |
2,614,124 | + | SGL_RS14055 | 0.62 | -0.2 | |
2,614,169 | + | SGL_RS14055 | 0.69 | -0.2 | |
2,614,169 | - | SGL_RS14055 | 0.69 | -0.8 | |
2,614,177 | - | SGL_RS14055 | 0.70 | -0.5 | |
2,614,206 | + | SGL_RS14055 | 0.75 | +0.2 | |
2,614,206 | + | SGL_RS14055 | 0.75 | +0.3 | |
2,614,216 | - | SGL_RS14055 | 0.76 | +0.0 | |
2,614,250 | - | SGL_RS14055 | 0.81 | -0.2 |
Or see this region's nucleotide sequence