Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS13895
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
2,579,596 | + | SGL_RS13890 | 0.35 | -1.8 | |
2,579,730 | - | SGL_RS13890 | 0.51 | -2.1 | |
2,579,934 | - | SGL_RS13890 | 0.76 | -1.8 | |
2,579,953 | + | SGL_RS13890 | 0.78 | -2.1 | |
2,580,006 | + | SGL_RS13890 | 0.84 | -1.6 | |
2,580,043 | + | SGL_RS13890 | 0.89 | -1.2 | |
2,580,191 | - | +0.0 | |||
2,580,332 | - | SGL_RS13895 | 0.15 | +2.1 | |
2,580,568 | + | +0.8 | |||
2,580,601 | + | +1.0 | |||
2,580,794 | - | +0.9 | |||
2,580,863 | + | SGL_RS13900 | 0.13 | -0.1 | |
2,580,938 | + | SGL_RS13900 | 0.19 | +1.3 | |
2,580,938 | + | SGL_RS13900 | 0.19 | +0.8 | |
2,580,940 | + | SGL_RS13900 | 0.19 | +1.4 | |
2,580,946 | - | SGL_RS13900 | 0.20 | +1.1 | |
2,580,947 | + | SGL_RS13900 | 0.20 | +1.1 | |
2,580,948 | - | SGL_RS13900 | 0.20 | +1.1 | |
2,581,025 | + | SGL_RS13900 | 0.27 | +1.3 | |
2,581,191 | - | SGL_RS13900 | 0.40 | +0.6 | |
2,581,438 | + | SGL_RS13900 | 0.61 | +0.8 |
Or see this region's nucleotide sequence