Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS12930
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
2,376,212 | - | SGL_RS12925 | 0.45 | +3.2 | |
2,376,221 | + | SGL_RS12925 | 0.45 | +3.5 | |
2,376,317 | - | SGL_RS12925 | 0.52 | +2.9 | |
2,376,417 | + | SGL_RS12925 | 0.58 | +3.1 | |
2,376,428 | + | SGL_RS12925 | 0.59 | +3.5 | |
2,376,519 | + | SGL_RS12925 | 0.65 | +3.2 | |
2,376,854 | - | SGL_RS12925 | 0.87 | +3.4 | |
2,376,931 | - | +3.1 | |||
2,376,947 | + | +3.3 | |||
2,376,955 | - | +2.6 | |||
2,376,957 | - | +2.8 | |||
2,377,389 | + | SGL_RS12930 | 0.60 | +2.3 | |
2,377,397 | - | SGL_RS12930 | 0.63 | +4.6 | |
2,377,397 | - | SGL_RS12930 | 0.63 | +3.2 | |
2,377,475 | + | SGL_RS12930 | 0.85 | -0.2 | |
2,377,574 | + | +1.9 | |||
2,377,616 | + | -0.1 | |||
2,377,732 | + | +1.5 | |||
2,377,735 | - | +0.5 | |||
2,377,740 | - | +0.2 | |||
2,377,757 | - | -0.2 | |||
2,377,992 | - | SGL_RS12935 | 0.23 | +0.3 | |
2,378,030 | - | SGL_RS12935 | 0.26 | -0.0 | |
2,378,111 | + | SGL_RS12935 | 0.33 | -0.5 | |
2,378,159 | + | SGL_RS12935 | 0.37 | -0.1 | |
2,378,159 | + | SGL_RS12935 | 0.37 | +0.3 | |
2,378,272 | + | SGL_RS12935 | 0.46 | -0.4 | |
2,378,280 | - | SGL_RS12935 | 0.46 | -0.4 | |
2,378,391 | - | SGL_RS12935 | 0.55 | +0.3 | |
2,378,467 | - | SGL_RS12935 | 0.62 | -0.4 | |
2,378,469 | + | SGL_RS12935 | 0.62 | +0.3 |
Or see this region's nucleotide sequence