Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS12905 and SGL_RS12910 are separated by 138 nucleotides SGL_RS12910 and SGL_RS12915 are separated by 113 nucleotides
SGL_RS12905: SGL_RS12905 - PAS domain-containing sensor histidine kinase, at 2,370,818 to 2,372,110
_RS12905
SGL_RS12910: SGL_RS12910 - acetyl-CoA carboxylase, carboxyltransferase subunit beta, at 2,372,249 to 2,373,229
_RS12910
SGL_RS12915: SGL_RS12915 - circularly permuted type 2 ATP-grasp protein, at 2,373,343 to 2,374,788
_RS12915
Position (kb)
2372
2373
2374 Strain fitness (log2 ratio)
-2
-1
0
1 at 2371.278 kb on - strand, within SGL_RS12905 at 2371.420 kb on - strand, within SGL_RS12905 at 2371.524 kb on - strand, within SGL_RS12905 at 2371.708 kb on - strand, within SGL_RS12905 at 2371.709 kb on - strand, within SGL_RS12905 at 2371.872 kb on + strand, within SGL_RS12905 at 2372.366 kb on + strand, within SGL_RS12910 at 2373.390 kb on + strand at 2373.426 kb on + strand at 2373.436 kb on + strand at 2373.534 kb on - strand, within SGL_RS12915 at 2373.559 kb on + strand, within SGL_RS12915 at 2373.648 kb on - strand, within SGL_RS12915 at 2373.695 kb on + strand, within SGL_RS12915 at 2373.855 kb on + strand, within SGL_RS12915 at 2373.858 kb on - strand, within SGL_RS12915 at 2373.858 kb on - strand, within SGL_RS12915 at 2373.883 kb on + strand, within SGL_RS12915 at 2373.932 kb on - strand, within SGL_RS12915 at 2373.976 kb on + strand, within SGL_RS12915 at 2374.116 kb on - strand, within SGL_RS12915 at 2374.126 kb on - strand, within SGL_RS12915
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 2,371,278 - SGL_RS12905 0.36 +0.3 2,371,420 - SGL_RS12905 0.47 +0.0 2,371,524 - SGL_RS12905 0.55 +0.6 2,371,708 - SGL_RS12905 0.69 +0.4 2,371,709 - SGL_RS12905 0.69 +1.0 2,371,872 + SGL_RS12905 0.82 +0.6 2,372,366 + SGL_RS12910 0.12 -2.7 2,373,390 + -0.2 2,373,426 + +1.0 2,373,436 + -0.7 2,373,534 - SGL_RS12915 0.13 -0.8 2,373,559 + SGL_RS12915 0.15 +0.2 2,373,648 - SGL_RS12915 0.21 +0.3 2,373,695 + SGL_RS12915 0.24 +0.0 2,373,855 + SGL_RS12915 0.35 +0.1 2,373,858 - SGL_RS12915 0.36 +0.2 2,373,858 - SGL_RS12915 0.36 +0.0 2,373,883 + SGL_RS12915 0.37 +0.2 2,373,932 - SGL_RS12915 0.41 -0.2 2,373,976 + SGL_RS12915 0.44 +0.6 2,374,116 - SGL_RS12915 0.53 -0.2 2,374,126 - SGL_RS12915 0.54 -0.0
Or see this region's nucleotide sequence