Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS12555
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
2,273,942 | + | SGL_RS12550 | 0.72 | +1.2 | |
2,273,942 | + | SGL_RS12550 | 0.72 | -0.1 | |
2,273,943 | - | SGL_RS12550 | 0.72 | +2.9 | |
2,274,062 | - | SGL_RS12550 | 0.75 | +1.0 | |
2,274,064 | + | SGL_RS12550 | 0.76 | +0.8 | |
2,274,072 | - | SGL_RS12550 | 0.76 | -1.3 | |
2,274,220 | - | SGL_RS12550 | 0.80 | -0.1 | |
2,274,270 | - | SGL_RS12550 | 0.82 | +0.4 | |
2,274,344 | + | SGL_RS12550 | 0.84 | +0.7 | |
2,274,352 | - | SGL_RS12550 | 0.84 | +1.4 | |
2,274,478 | - | SGL_RS12550 | 0.88 | +0.1 | |
2,274,598 | - | +2.5 | |||
2,274,598 | - | +1.4 | |||
2,275,895 | - | SGL_RS12555 | 0.33 | +3.2 | |
2,277,200 | + | SGL_RS12555 | 0.75 | +3.5 | |
2,277,208 | - | SGL_RS12555 | 0.75 | +2.4 | |
2,278,254 | + | SGL_RS12560 | 0.30 | -4.6 | |
2,278,267 | + | SGL_RS12560 | 0.31 | -6.2 | |
2,278,310 | - | SGL_RS12560 | 0.36 | -3.4 | |
2,278,372 | + | SGL_RS12560 | 0.43 | -4.0 | |
2,278,382 | - | SGL_RS12560 | 0.44 | -3.7 | |
2,278,734 | + | SGL_RS12560 | 0.84 | -4.5 | |
2,278,996 | - | SGL_RS12565 | 0.15 | -0.1 |
Or see this region's nucleotide sequence