Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS12445
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
|---|---|---|---|---|---|
| remove | |||||
| 2,246,031 | - | SGL_RS12440 | 0.40 | +0.9 | |
| 2,246,240 | + | SGL_RS12440 | 0.61 | +0.6 | |
| 2,246,301 | + | SGL_RS12440 | 0.67 | +0.5 | |
| 2,246,332 | + | SGL_RS12440 | 0.70 | +0.7 | |
| 2,247,578 | - | SGL_RS12445 | 0.44 | -0.5 | |
| 2,247,580 | - | SGL_RS12445 | 0.44 | +0.0 | |
| 2,247,707 | + | SGL_RS12445 | 0.52 | +0.1 | |
| 2,247,769 | - | SGL_RS12445 | 0.56 | -0.2 | |
| 2,247,785 | - | SGL_RS12445 | 0.57 | -0.1 | |
| 2,247,899 | + | SGL_RS12445 | 0.64 | -0.7 | |
| 2,247,940 | + | SGL_RS12445 | 0.66 | +0.7 | |
| 2,247,971 | + | SGL_RS12445 | 0.68 | -0.8 | |
| 2,247,971 | + | SGL_RS12445 | 0.68 | +0.4 | |
| 2,247,995 | - | SGL_RS12445 | 0.70 | +0.1 | |
| 2,248,014 | + | SGL_RS12445 | 0.71 | +0.7 | |
| 2,248,238 | - | SGL_RS12445 | 0.85 | +0.2 | |
| 2,248,291 | + | SGL_RS12445 | 0.88 | -0.4 | |
| 2,248,298 | + | SGL_RS12445 | 0.88 | -0.0 | |
| 2,248,472 | - | -0.2 | |||
| 2,248,498 | - | -0.2 | |||
| 2,248,551 | + | +1.5 |
Or see this region's nucleotide sequence