Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS12415

Experiment: Nickel (II) sulfate 5 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) sulfate 5 uM
2,240,456	+		SGL_RS12410	0.61	+0.1
2,240,613	+		SGL_RS12410	0.68	+0.1
2,240,613	+		SGL_RS12410	0.68	+0.0
2,240,621	-		SGL_RS12410	0.69	-0.4
2,240,625	+		SGL_RS12410	0.69	+0.1
2,240,727	+		SGL_RS12410	0.74	+0.2
2,240,728	+		SGL_RS12410	0.74	+0.1
2,240,758	-		SGL_RS12410	0.76	-0.3
2,240,803	-		SGL_RS12410	0.78	+0.6
2,240,811	+		SGL_RS12410	0.78	-0.5
2,240,954	-		SGL_RS12410	0.85	+0.3
2,240,955	+		SGL_RS12410	0.85	+0.6
2,241,001	-		SGL_RS12410	0.88	+0.3
2,241,054	+				+0.3
2,241,064	+				-0.2
2,241,086	-				+0.2
2,241,096	-				-0.1
2,241,103	+				+0.3
2,241,338	-				-1.3
2,241,338	-				-0.3
2,241,411	+				-0.9
2,241,419	-				-0.9
2,241,442	-				-0.7
2,241,442	-				-0.7
2,241,442	-				-1.1
2,241,454	+				-0.8
2,241,605	+		SGL_RS12415	0.17	-1.0
2,241,642	+		SGL_RS12415	0.20	+1.3
2,241,674	-		SGL_RS12415	0.22	-1.1
2,241,684	-		SGL_RS12415	0.23	-1.5
2,241,870	-		SGL_RS12415	0.36	-0.2
2,241,894	+		SGL_RS12415	0.38	-0.6
2,241,902	-		SGL_RS12415	0.38	-0.4
2,242,022	+		SGL_RS12415	0.47	-0.5
2,242,061	+		SGL_RS12415	0.49	-0.9
2,242,071	+		SGL_RS12415	0.50	-0.7
2,242,102	-		SGL_RS12415	0.52	-0.4
2,242,102	-		SGL_RS12415	0.52	-1.0
2,242,370	+		SGL_RS12415	0.71	-0.6
2,242,537	-		SGL_RS12415	0.82	-0.3
2,242,567	+		SGL_RS12415	0.85	-1.1
2,242,575	-		SGL_RS12415	0.85	-0.4
2,242,580	-		SGL_RS12415	0.85	-1.0
2,243,122	+				-0.1
2,243,187	-				+0.3
2,243,405	+		SGL_RS12425	0.33	-0.1
2,243,420	+		SGL_RS12425	0.36	-0.1
2,243,420	+		SGL_RS12425	0.36	-0.3
2,243,428	-		SGL_RS12425	0.38	-0.2
2,243,428	-		SGL_RS12425	0.38	+0.7
2,243,451	+		SGL_RS12425	0.42	+0.5
2,243,459	-		SGL_RS12425	0.44	+0.3
2,243,459	-		SGL_RS12425	0.44	-0.5
2,243,459	-		SGL_RS12425	0.44	-0.1
2,243,459	-		SGL_RS12425	0.44	-3.5
2,243,493	+		SGL_RS12425	0.51	-0.3
2,243,505	+		SGL_RS12425	0.54	+0.1
2,243,553	+		SGL_RS12425	0.64	-0.1
2,243,664	-		SGL_RS12425	0.87	-0.2