Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS11435
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
2,023,874 | + | SGL_RS11425 | 0.81 | +0.3 | |
2,023,915 | + | SGL_RS11425 | 0.87 | +0.8 | |
2,024,555 | - | +1.6 | |||
2,024,617 | + | SGL_RS11435 | 0.16 | +1.1 | |
2,024,620 | - | SGL_RS11435 | 0.16 | +1.4 | |
2,024,643 | + | SGL_RS11435 | 0.22 | +0.2 | |
2,024,866 | - | SGL_RS11435 | 0.73 | +1.3 | |
2,024,874 | - | SGL_RS11435 | 0.75 | +1.2 | |
2,024,939 | + | -0.3 | |||
2,025,040 | + | +2.4 | |||
2,025,057 | - | +2.0 | |||
2,025,165 | - | SGL_RS11440 | 0.15 | +2.3 | |
2,025,206 | - | SGL_RS11440 | 0.18 | +2.9 | |
2,025,253 | - | SGL_RS11440 | 0.23 | +2.3 | |
2,025,395 | + | SGL_RS11440 | 0.35 | +2.4 | |
2,025,432 | + | SGL_RS11440 | 0.38 | +2.6 | |
2,025,493 | + | SGL_RS11440 | 0.43 | +2.4 | |
2,025,567 | - | SGL_RS11440 | 0.50 | +2.2 | |
2,025,578 | + | SGL_RS11440 | 0.51 | +2.3 | |
2,025,724 | + | SGL_RS11440 | 0.63 | +2.5 | |
2,025,739 | - | SGL_RS11440 | 0.65 | +2.7 | |
2,025,770 | - | SGL_RS11440 | 0.67 | +2.3 | |
2,025,884 | + | SGL_RS11440 | 0.77 | +2.3 | |
2,025,904 | + | SGL_RS11440 | 0.79 | +2.8 | |
2,025,926 | + | SGL_RS11440 | 0.81 | +2.8 | |
2,025,934 | - | SGL_RS11440 | 0.81 | +2.7 |
Or see this region's nucleotide sequence