Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS10510 and SGL_RS10515 are separated by 89 nucleotides SGL_RS10515 and SGL_RS10520 are separated by 61 nucleotides SGL_RS10520 and SGL_RS10525 are separated by 130 nucleotides
SGL_RS10510: SGL_RS10510 - membrane protein insertase YidC, at 1,827,753 to 1,828,907
_RS10510
SGL_RS10515: SGL_RS10515 - protein jag, at 1,828,997 to 1,829,491
_RS10515
SGL_RS10520: SGL_RS10520 - J domain-containing protein, at 1,829,553 to 1,830,497
_RS10520
SGL_RS10525: SGL_RS10525 - inositol monophosphatase family protein, at 1,830,628 to 1,831,491
_RS10525
Position (kb) 1829
1830
1831 Strain fitness (log2 ratio) -1
0
1
2 at 1829.272 kb on - strand, within SGL_RS10515 at 1829.379 kb on - strand, within SGL_RS10515 at 1829.699 kb on - strand, within SGL_RS10520 at 1829.714 kb on - strand, within SGL_RS10520 at 1829.820 kb on + strand, within SGL_RS10520 at 1829.938 kb on + strand, within SGL_RS10520 at 1830.065 kb on - strand, within SGL_RS10520 at 1830.200 kb on + strand, within SGL_RS10520 at 1830.347 kb on + strand, within SGL_RS10520 at 1830.669 kb on + strand at 1830.675 kb on - strand at 1830.740 kb on + strand, within SGL_RS10525 at 1830.899 kb on - strand, within SGL_RS10525 at 1830.976 kb on + strand, within SGL_RS10525 at 1831.164 kb on - strand, within SGL_RS10525 at 1831.169 kb on - strand, within SGL_RS10525 at 1831.174 kb on - strand, within SGL_RS10525 at 1831.272 kb on + strand, within SGL_RS10525 at 1831.280 kb on - strand, within SGL_RS10525
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 1,829,272 - SGL_RS10515 0.56 +1.4 1,829,379 - SGL_RS10515 0.77 +0.8 1,829,699 - SGL_RS10520 0.15 +1.8 1,829,714 - SGL_RS10520 0.17 +2.2 1,829,820 + SGL_RS10520 0.28 +2.3 1,829,938 + SGL_RS10520 0.41 +2.0 1,830,065 - SGL_RS10520 0.54 +2.6 1,830,200 + SGL_RS10520 0.68 +1.8 1,830,347 + SGL_RS10520 0.84 +2.3 1,830,669 + -0.4 1,830,675 - +0.6 1,830,740 + SGL_RS10525 0.13 +0.6 1,830,899 - SGL_RS10525 0.31 +0.1 1,830,976 + SGL_RS10525 0.40 +0.4 1,831,164 - SGL_RS10525 0.62 +0.4 1,831,169 - SGL_RS10525 0.63 +1.0 1,831,174 - SGL_RS10525 0.63 +0.5 1,831,272 + SGL_RS10525 0.75 -0.4 1,831,280 - SGL_RS10525 0.75 +0.3
Or see this region's nucleotide sequence