Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS10280
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
1,779,420 | + | SGL_RS10275 | 0.75 | -0.3 | |
1,779,462 | - | SGL_RS10275 | 0.77 | -0.7 | |
1,779,855 | + | -0.8 | |||
1,779,871 | - | -1.1 | |||
1,779,888 | - | -1.2 | |||
1,779,964 | - | -0.3 | |||
1,780,219 | + | SGL_RS10280 | 0.62 | +0.8 | |
1,780,219 | + | SGL_RS10280 | 0.62 | +1.1 | |
1,780,227 | - | SGL_RS10280 | 0.66 | +0.8 | |
1,780,227 | - | SGL_RS10280 | 0.66 | +0.7 | |
1,780,255 | - | SGL_RS10280 | 0.79 | +1.1 | |
1,780,287 | - | +1.4 | |||
1,780,320 | + | +0.2 | |||
1,780,383 | + | +0.4 | |||
1,780,456 | + | +0.6 | |||
1,780,581 | + | SGL_RS10285 | 0.19 | +0.1 | |
1,780,737 | - | SGL_RS10285 | 0.48 | +0.5 | |
1,780,752 | + | SGL_RS10285 | 0.51 | +0.9 | |
1,780,778 | - | SGL_RS10285 | 0.56 | +0.3 | |
1,780,806 | + | SGL_RS10285 | 0.62 | +0.3 | |
1,780,948 | - | SGL_RS10285 | 0.89 | +0.4 | |
1,780,960 | + | -0.1 | |||
1,780,978 | + | +0.2 | |||
1,780,994 | + | +0.2 | |||
1,780,999 | + | -0.4 | |||
1,781,046 | - | -0.4 | |||
1,781,053 | - | -0.9 |
Or see this region's nucleotide sequence