Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS08975
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
1,519,049 | + | +0.2 | |||
1,519,064 | - | +0.2 | |||
1,519,087 | - | +0.9 | |||
1,519,118 | - | -0.2 | |||
1,519,118 | - | -0.0 | |||
1,519,370 | - | SGL_RS08970 | 0.30 | -1.8 | |
1,519,549 | + | SGL_RS08970 | 0.52 | -2.7 | |
1,519,551 | + | SGL_RS08970 | 0.52 | -2.0 | |
1,519,907 | + | -3.6 | |||
1,519,997 | + | -0.1 | |||
1,520,014 | - | +0.1 | |||
1,520,032 | + | +1.0 | |||
1,520,037 | + | +0.4 | |||
1,520,075 | + | +0.7 | |||
1,520,176 | + | SGL_RS08975 | 0.15 | +0.5 | |
1,520,328 | - | SGL_RS08975 | 0.29 | +0.9 | |
1,520,424 | + | SGL_RS08975 | 0.38 | +1.0 | |
1,520,503 | + | SGL_RS08975 | 0.45 | +0.8 | |
1,520,582 | - | SGL_RS08975 | 0.52 | +0.9 | |
1,520,582 | - | SGL_RS08975 | 0.52 | +1.0 | |
1,520,776 | + | SGL_RS08975 | 0.70 | +1.3 | |
1,520,840 | + | SGL_RS08975 | 0.76 | +0.4 | |
1,520,913 | + | SGL_RS08975 | 0.83 | +1.1 | |
1,520,965 | - | SGL_RS08975 | 0.88 | +0.8 | |
1,520,984 | + | SGL_RS08975 | 0.89 | +0.5 | |
1,521,023 | - | +0.8 | |||
1,521,029 | - | +0.7 | |||
1,521,090 | + | +0.3 | |||
1,521,197 | - | -0.2 |
Or see this region's nucleotide sequence