Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS08920 and SGL_RS08925 are separated by 42 nucleotides SGL_RS08925 and SGL_RS08930 are separated by 50 nucleotides SGL_RS08930 and SGL_RS08935 are separated by 38 nucleotides SGL_RS08935 and SGL_RS08940 are separated by 99 nucleotides
SGL_RS08920: SGL_RS08920 - NAD(P)H-quinone oxidoreductase subunit H, at 1,509,990 to 1,511,174
_RS08920
SGL_RS08925: SGL_RS08925 - hypothetical protein, at 1,511,217 to 1,511,621
_RS08925
SGL_RS08930: SGL_RS08930 - hypothetical protein, at 1,511,672 to 1,511,977
_RS08930
SGL_RS08935: SGL_RS08935 - YheT family hydrolase, at 1,512,016 to 1,513,125
_RS08935
SGL_RS08940: SGL_RS08940 - IS5 family transposase, at 1,513,225 to 1,514,010
_RS08940
Position (kb) 1512
1513
1514 Strain fitness (log2 ratio) -1
0
1 at 1511.358 kb on + strand, within SGL_RS08925 at 1511.366 kb on - strand, within SGL_RS08925 at 1511.457 kb on - strand, within SGL_RS08925 at 1511.700 kb on + strand at 1511.713 kb on - strand, within SGL_RS08930 at 1511.837 kb on - strand, within SGL_RS08930 at 1511.883 kb on - strand, within SGL_RS08930 at 1511.906 kb on + strand, within SGL_RS08930 at 1511.908 kb on + strand, within SGL_RS08930 at 1511.914 kb on - strand, within SGL_RS08930 at 1511.989 kb on + strand at 1512.002 kb on - strand at 1512.107 kb on - strand at 1512.197 kb on + strand, within SGL_RS08935 at 1512.392 kb on + strand, within SGL_RS08935 at 1512.400 kb on - strand, within SGL_RS08935 at 1512.400 kb on - strand, within SGL_RS08935 at 1512.460 kb on + strand, within SGL_RS08935 at 1512.478 kb on - strand, within SGL_RS08935 at 1512.497 kb on + strand, within SGL_RS08935 at 1512.600 kb on + strand, within SGL_RS08935 at 1512.777 kb on + strand, within SGL_RS08935 at 1512.834 kb on - strand, within SGL_RS08935 at 1512.914 kb on - strand, within SGL_RS08935 at 1512.960 kb on - strand, within SGL_RS08935 at 1513.002 kb on + strand, within SGL_RS08935 at 1513.010 kb on - strand, within SGL_RS08935 at 1514.055 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 1,511,358 + SGL_RS08925 0.35 -1.0 1,511,366 - SGL_RS08925 0.37 -1.0 1,511,457 - SGL_RS08925 0.59 -0.6 1,511,700 + +0.2 1,511,713 - SGL_RS08930 0.13 +1.1 1,511,837 - SGL_RS08930 0.54 +1.0 1,511,883 - SGL_RS08930 0.69 -0.8 1,511,906 + SGL_RS08930 0.76 -0.1 1,511,908 + SGL_RS08930 0.77 +0.4 1,511,914 - SGL_RS08930 0.79 -0.5 1,511,989 + -0.2 1,512,002 - +0.2 1,512,107 - +0.3 1,512,197 + SGL_RS08935 0.16 +0.2 1,512,392 + SGL_RS08935 0.34 +0.5 1,512,400 - SGL_RS08935 0.35 +0.9 1,512,400 - SGL_RS08935 0.35 -0.5 1,512,460 + SGL_RS08935 0.40 +0.1 1,512,478 - SGL_RS08935 0.42 -0.2 1,512,497 + SGL_RS08935 0.43 -0.0 1,512,600 + SGL_RS08935 0.53 +0.1 1,512,777 + SGL_RS08935 0.69 +0.0 1,512,834 - SGL_RS08935 0.74 -1.0 1,512,914 - SGL_RS08935 0.81 -0.3 1,512,960 - SGL_RS08935 0.85 -0.1 1,513,002 + SGL_RS08935 0.89 -0.8 1,513,010 - SGL_RS08935 0.90 +0.4 1,514,055 - -0.1
Or see this region's nucleotide sequence