Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS08605
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
1,434,722 | + | +0.2 | |||
1,434,722 | + | +0.3 | |||
1,434,745 | - | -0.1 | |||
1,434,745 | - | -0.3 | |||
1,434,890 | - | +0.3 | |||
1,434,971 | - | +0.3 | |||
1,435,146 | + | SGL_RS08605 | 0.34 | +1.4 | |
1,435,245 | - | SGL_RS08605 | 0.48 | +2.2 | |
1,435,257 | + | SGL_RS08605 | 0.49 | +2.7 | |
1,435,264 | + | SGL_RS08605 | 0.50 | +3.7 | |
1,435,333 | - | SGL_RS08605 | 0.60 | +3.3 | |
1,435,444 | - | SGL_RS08605 | 0.75 | +2.6 | |
1,435,497 | - | SGL_RS08605 | 0.82 | +2.6 | |
1,435,808 | + | SGL_RS08610 | 0.16 | +1.5 | |
1,435,941 | + | SGL_RS08610 | 0.29 | +2.2 | |
1,435,949 | - | SGL_RS08610 | 0.30 | +1.6 | |
1,436,072 | - | SGL_RS08610 | 0.42 | +2.1 | |
1,436,077 | + | SGL_RS08610 | 0.43 | +1.6 | |
1,436,085 | - | SGL_RS08610 | 0.43 | +1.5 | |
1,436,146 | - | SGL_RS08610 | 0.49 | +1.8 | |
1,436,305 | + | SGL_RS08610 | 0.65 | +1.6 | |
1,436,384 | + | SGL_RS08610 | 0.73 | +0.2 | |
1,436,502 | - | SGL_RS08610 | 0.85 | +1.9 | |
1,436,550 | + | SGL_RS08610 | 0.89 | +1.5 | |
1,436,558 | - | +1.5 | |||
1,436,601 | - | +1.9 | |||
1,436,619 | - | +0.9 |
Or see this region's nucleotide sequence