Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS07700
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
1,244,414 | - | -4.2 | |||
1,244,552 | + | SGL_RS19585 | 0.68 | -6.9 | |
1,244,621 | + | -1.2 | |||
1,244,628 | - | -0.2 | |||
1,244,835 | - | SGL_RS07695 | 0.18 | -0.3 | |
1,244,882 | - | SGL_RS07695 | 0.26 | -0.3 | |
1,244,989 | - | SGL_RS07695 | 0.45 | +0.5 | |
1,245,080 | - | SGL_RS07695 | 0.60 | +0.4 | |
1,245,094 | + | SGL_RS07695 | 0.63 | -0.1 | |
1,245,125 | + | SGL_RS07695 | 0.68 | -0.2 | |
1,245,141 | + | SGL_RS07695 | 0.71 | -0.0 | |
1,245,148 | + | SGL_RS07695 | 0.72 | -1.2 | |
1,245,207 | + | SGL_RS07695 | 0.82 | +0.4 | |
1,245,339 | + | +0.4 | |||
1,245,730 | - | SGL_RS07700 | 0.72 | +1.0 | |
1,245,854 | + | +0.3 | |||
1,245,861 | - | -0.4 | |||
1,246,125 | + | SGL_RS07705 | 0.20 | -0.6 | |
1,246,326 | - | SGL_RS07705 | 0.37 | +0.3 | |
1,246,336 | + | SGL_RS07705 | 0.38 | -0.6 | |
1,246,381 | + | SGL_RS07705 | 0.42 | -0.9 | |
1,246,389 | - | SGL_RS07705 | 0.43 | -0.2 | |
1,246,644 | - | SGL_RS07705 | 0.65 | -0.3 | |
1,246,646 | + | SGL_RS07705 | 0.65 | -0.6 | |
1,246,726 | + | SGL_RS07705 | 0.72 | -1.4 | |
1,246,734 | - | SGL_RS07705 | 0.73 | -1.2 |
Or see this region's nucleotide sequence