Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS06590
Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 5 uM |
---|---|---|---|---|---|
remove | |||||
1,007,660 | - | SGL_RS06585 | 0.71 | +0.4 | |
1,007,864 | + | SGL_RS06585 | 0.81 | +2.4 | |
1,007,869 | + | SGL_RS06585 | 0.81 | -1.0 | |
1,008,187 | - | +1.6 | |||
1,008,438 | + | SGL_RS06590 | 0.14 | +1.5 | |
1,008,438 | + | SGL_RS06590 | 0.14 | +0.0 | |
1,008,647 | - | SGL_RS06590 | 0.39 | -0.0 | |
1,008,724 | - | SGL_RS06590 | 0.49 | +0.5 | |
1,008,756 | + | SGL_RS06590 | 0.53 | +1.0 | |
1,008,842 | + | SGL_RS06590 | 0.63 | +0.7 | |
1,008,866 | + | SGL_RS06590 | 0.66 | +1.7 | |
1,008,886 | - | SGL_RS06590 | 0.68 | +1.7 | |
1,008,991 | + | SGL_RS06590 | 0.81 | -0.5 | |
1,008,999 | - | SGL_RS06590 | 0.82 | +2.5 | |
1,009,002 | + | SGL_RS06590 | 0.82 | +1.6 | |
1,009,200 | - | -0.2 | |||
1,009,272 | - | +1.8 | |||
1,009,272 | - | +0.3 | |||
1,009,395 | - | SGL_RS06595 | 0.12 | +0.5 | |
1,009,395 | - | SGL_RS06595 | 0.12 | +1.0 | |
1,009,724 | + | SGL_RS06595 | 0.37 | +3.0 | |
1,009,852 | - | SGL_RS06595 | 0.46 | +0.2 | |
1,010,014 | - | SGL_RS06595 | 0.58 | +0.8 | |
1,010,060 | - | SGL_RS06595 | 0.62 | +1.8 |
Or see this region's nucleotide sequence