Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06105 and SGL_RS06110 are separated by 68 nucleotides SGL_RS06110 and SGL_RS06115 are separated by 287 nucleotides
SGL_RS06105: SGL_RS06105 - magnesium transporter, at 904,115 to 905,506
_RS06105
SGL_RS06110: SGL_RS06110 - glycosyltransferase family 4 protein, at 905,575 to 906,762
_RS06110
SGL_RS06115: SGL_RS06115 - DUF1868 domain-containing protein, at 907,050 to 907,826
_RS06115
Position (kb) 905
906
907 Strain fitness (log2 ratio) -1
0
1
2 at 904.577 kb on - strand, within SGL_RS06105 at 904.582 kb on - strand, within SGL_RS06105 at 904.613 kb on + strand, within SGL_RS06105 at 904.621 kb on - strand, within SGL_RS06105 at 904.621 kb on - strand, within SGL_RS06105 at 904.695 kb on + strand, within SGL_RS06105 at 904.701 kb on + strand, within SGL_RS06105 at 904.783 kb on + strand, within SGL_RS06105 at 904.823 kb on - strand, within SGL_RS06105 at 904.912 kb on - strand, within SGL_RS06105 at 904.928 kb on + strand, within SGL_RS06105 at 904.947 kb on - strand, within SGL_RS06105 at 904.962 kb on - strand, within SGL_RS06105 at 905.037 kb on + strand, within SGL_RS06105 at 905.045 kb on - strand, within SGL_RS06105 at 905.107 kb on + strand, within SGL_RS06105 at 905.115 kb on - strand, within SGL_RS06105 at 905.152 kb on + strand, within SGL_RS06105 at 905.152 kb on + strand, within SGL_RS06105 at 905.160 kb on - strand, within SGL_RS06105 at 905.160 kb on - strand, within SGL_RS06105 at 905.209 kb on - strand, within SGL_RS06105 at 905.261 kb on - strand, within SGL_RS06105 at 905.261 kb on - strand, within SGL_RS06105 at 905.271 kb on - strand, within SGL_RS06105 at 905.279 kb on + strand, within SGL_RS06105 at 905.307 kb on + strand, within SGL_RS06105 at 905.336 kb on - strand, within SGL_RS06105 at 905.346 kb on - strand, within SGL_RS06105 at 905.874 kb on - strand, within SGL_RS06110 at 905.902 kb on + strand, within SGL_RS06110 at 906.346 kb on + strand, within SGL_RS06110 at 906.379 kb on + strand, within SGL_RS06110 at 906.379 kb on + strand, within SGL_RS06110 at 906.463 kb on + strand, within SGL_RS06110 at 906.482 kb on - strand, within SGL_RS06110 at 906.696 kb on - strand at 906.712 kb on + strand at 906.832 kb on - strand at 907.009 kb on - strand at 907.041 kb on - strand at 907.052 kb on + strand at 907.068 kb on + strand at 907.113 kb on - strand at 907.264 kb on - strand, within SGL_RS06115 at 907.319 kb on + strand, within SGL_RS06115 at 907.345 kb on + strand, within SGL_RS06115 at 907.345 kb on + strand, within SGL_RS06115 at 907.353 kb on - strand, within SGL_RS06115 at 907.359 kb on - strand, within SGL_RS06115 at 907.364 kb on - strand, within SGL_RS06115 at 907.431 kb on + strand, within SGL_RS06115 at 907.464 kb on - strand, within SGL_RS06115 at 907.482 kb on + strand, within SGL_RS06115 at 907.557 kb on - strand, within SGL_RS06115 at 907.618 kb on - strand, within SGL_RS06115 at 907.629 kb on + strand, within SGL_RS06115 at 907.630 kb on + strand, within SGL_RS06115 at 907.745 kb on + strand, within SGL_RS06115 at 907.751 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 904,577 - SGL_RS06105 0.33 +0.2 904,582 - SGL_RS06105 0.34 -0.4 904,613 + SGL_RS06105 0.36 -0.1 904,621 - SGL_RS06105 0.36 -0.2 904,621 - SGL_RS06105 0.36 +0.6 904,695 + SGL_RS06105 0.42 +0.2 904,701 + SGL_RS06105 0.42 -0.7 904,783 + SGL_RS06105 0.48 +0.4 904,823 - SGL_RS06105 0.51 -0.6 904,912 - SGL_RS06105 0.57 -0.5 904,928 + SGL_RS06105 0.58 -0.0 904,947 - SGL_RS06105 0.60 +0.1 904,962 - SGL_RS06105 0.61 +0.2 905,037 + SGL_RS06105 0.66 +0.1 905,045 - SGL_RS06105 0.67 -0.0 905,107 + SGL_RS06105 0.71 +0.5 905,115 - SGL_RS06105 0.72 +0.1 905,152 + SGL_RS06105 0.74 -0.1 905,152 + SGL_RS06105 0.74 +0.4 905,160 - SGL_RS06105 0.75 -0.1 905,160 - SGL_RS06105 0.75 -0.3 905,209 - SGL_RS06105 0.79 -0.4 905,261 - SGL_RS06105 0.82 -0.3 905,261 - SGL_RS06105 0.82 -0.1 905,271 - SGL_RS06105 0.83 +0.0 905,279 + SGL_RS06105 0.84 -1.4 905,307 + SGL_RS06105 0.86 -0.3 905,336 - SGL_RS06105 0.88 -0.1 905,346 - SGL_RS06105 0.88 +0.3 905,874 - SGL_RS06110 0.25 +1.5 905,902 + SGL_RS06110 0.28 +1.6 906,346 + SGL_RS06110 0.65 +1.4 906,379 + SGL_RS06110 0.68 +1.4 906,379 + SGL_RS06110 0.68 +1.0 906,463 + SGL_RS06110 0.75 +1.9 906,482 - SGL_RS06110 0.76 +0.8 906,696 - +0.3 906,712 + +2.1 906,832 - -0.2 907,009 - +0.0 907,041 - +1.0 907,052 + +1.8 907,068 + +0.6 907,113 - +0.7 907,264 - SGL_RS06115 0.28 +1.1 907,319 + SGL_RS06115 0.35 +1.6 907,345 + SGL_RS06115 0.38 +1.2 907,345 + SGL_RS06115 0.38 +1.2 907,353 - SGL_RS06115 0.39 +1.2 907,359 - SGL_RS06115 0.40 +1.2 907,364 - SGL_RS06115 0.40 +0.7 907,431 + SGL_RS06115 0.49 +0.7 907,464 - SGL_RS06115 0.53 +1.9 907,482 + SGL_RS06115 0.56 +2.0 907,557 - SGL_RS06115 0.65 +1.3 907,618 - SGL_RS06115 0.73 +1.3 907,629 + SGL_RS06115 0.75 +0.5 907,630 + SGL_RS06115 0.75 +1.5 907,745 + SGL_RS06115 0.89 +0.9 907,751 - +1.1
Or see this region's nucleotide sequence