Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS05645 and SGL_RS05650 are separated by 82 nucleotides SGL_RS05650 and SGL_RS05655 are separated by 40 nucleotides SGL_RS05655 and SGL_RS05660 are separated by 156 nucleotides
SGL_RS05645: SGL_RS05645 - hypothetical protein, at 815,703 to 816,215
_RS05645
SGL_RS05650: SGL_RS05650 - Uma2 family endonuclease, at 816,298 to 816,942
_RS05650
SGL_RS05655: SGL_RS05655 - TPM domain-containing protein, at 816,983 to 817,810
_RS05655
SGL_RS05660: SGL_RS05660 - transketolase, at 817,967 to 819,979
_RS05660
Position (kb) 816
817
818 Strain fitness (log2 ratio) -1
0
1
2
3 at 816.016 kb on - strand, within SGL_RS05645 at 816.062 kb on - strand, within SGL_RS05645 at 816.062 kb on - strand, within SGL_RS05645 at 816.071 kb on + strand, within SGL_RS05645 at 816.099 kb on + strand, within SGL_RS05645 at 816.187 kb on + strand at 816.687 kb on + strand, within SGL_RS05650 at 816.722 kb on + strand, within SGL_RS05650 at 816.752 kb on + strand, within SGL_RS05650 at 816.790 kb on + strand, within SGL_RS05650 at 816.963 kb on + strand at 817.263 kb on + strand, within SGL_RS05655 at 817.263 kb on + strand, within SGL_RS05655 at 817.263 kb on + strand, within SGL_RS05655 at 817.263 kb on + strand, within SGL_RS05655 at 817.296 kb on + strand, within SGL_RS05655 at 817.576 kb on - strand, within SGL_RS05655 at 817.865 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 816,016 - SGL_RS05645 0.61 -0.4 816,062 - SGL_RS05645 0.70 -0.0 816,062 - SGL_RS05645 0.70 +0.1 816,071 + SGL_RS05645 0.72 -0.2 816,099 + SGL_RS05645 0.77 -0.3 816,187 + -0.0 816,687 + SGL_RS05650 0.60 +0.3 816,722 + SGL_RS05650 0.66 -0.1 816,752 + SGL_RS05650 0.70 -0.1 816,790 + SGL_RS05650 0.76 +0.1 816,963 + +0.1 817,263 + SGL_RS05655 0.34 +2.9 817,263 + SGL_RS05655 0.34 +3.3 817,263 + SGL_RS05655 0.34 +2.5 817,263 + SGL_RS05655 0.34 +2.0 817,296 + SGL_RS05655 0.38 +3.2 817,576 - SGL_RS05655 0.72 +2.8 817,865 - +0.6
Or see this region's nucleotide sequence