Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03890 and SGL_RS03895 are separated by 127 nucleotides SGL_RS03895 and SGL_RS03900 are separated by 3 nucleotides
SGL_RS03890: SGL_RS03890 - MraY family glycosyltransferase, at 423,490 to 424,566
_RS03890
SGL_RS03895: SGL_RS03895 - MBL fold metallo-hydrolase, at 424,694 to 425,464
_RS03895
SGL_RS03900: SGL_RS03900 - adenylate/guanylate cyclase domain-containing protein, at 425,468 to 427,738
_RS03900
Position (kb) 424
425
426 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 424.641 kb on - strand at 424.671 kb on + strand at 424.691 kb on + strand at 424.699 kb on - strand at 424.848 kb on + strand, within SGL_RS03895 at 424.856 kb on - strand, within SGL_RS03895 at 424.856 kb on - strand, within SGL_RS03895 at 424.994 kb on + strand, within SGL_RS03895 at 425.139 kb on + strand, within SGL_RS03895 at 425.311 kb on + strand, within SGL_RS03895 at 425.313 kb on - strand, within SGL_RS03895 at 425.391 kb on + strand at 425.465 kb on + strand at 425.611 kb on - strand at 425.611 kb on - strand at 425.611 kb on - strand at 425.623 kb on - strand at 425.869 kb on + strand, within SGL_RS03900 at 425.913 kb on + strand, within SGL_RS03900 at 425.921 kb on - strand, within SGL_RS03900 at 425.936 kb on - strand, within SGL_RS03900 at 425.938 kb on + strand, within SGL_RS03900 at 425.965 kb on + strand, within SGL_RS03900 at 425.966 kb on + strand, within SGL_RS03900 at 425.966 kb on + strand, within SGL_RS03900 at 425.974 kb on - strand, within SGL_RS03900 at 425.974 kb on - strand, within SGL_RS03900 at 425.974 kb on - strand, within SGL_RS03900 at 426.006 kb on + strand, within SGL_RS03900 at 426.006 kb on + strand, within SGL_RS03900 at 426.115 kb on - strand, within SGL_RS03900 at 426.195 kb on + strand, within SGL_RS03900 at 426.203 kb on - strand, within SGL_RS03900 at 426.414 kb on - strand, within SGL_RS03900 at 426.445 kb on + strand, within SGL_RS03900
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 424,641 - +0.5 424,671 + +0.2 424,691 + +0.4 424,699 - +0.1 424,848 + SGL_RS03895 0.20 -3.1 424,856 - SGL_RS03895 0.21 -2.4 424,856 - SGL_RS03895 0.21 -0.8 424,994 + SGL_RS03895 0.39 -2.7 425,139 + SGL_RS03895 0.58 -1.7 425,311 + SGL_RS03895 0.80 -3.7 425,313 - SGL_RS03895 0.80 -2.4 425,391 + -2.0 425,465 + -1.4 425,611 - +0.8 425,611 - -0.1 425,611 - -0.1 425,623 - +0.1 425,869 + SGL_RS03900 0.18 +0.1 425,913 + SGL_RS03900 0.20 +0.1 425,921 - SGL_RS03900 0.20 +0.1 425,936 - SGL_RS03900 0.21 +0.3 425,938 + SGL_RS03900 0.21 +0.7 425,965 + SGL_RS03900 0.22 +0.6 425,966 + SGL_RS03900 0.22 +0.1 425,966 + SGL_RS03900 0.22 +0.3 425,974 - SGL_RS03900 0.22 +0.2 425,974 - SGL_RS03900 0.22 +0.5 425,974 - SGL_RS03900 0.22 +0.1 426,006 + SGL_RS03900 0.24 +0.0 426,006 + SGL_RS03900 0.24 +0.3 426,115 - SGL_RS03900 0.28 +0.1 426,195 + SGL_RS03900 0.32 +0.5 426,203 - SGL_RS03900 0.32 +0.0 426,414 - SGL_RS03900 0.42 -0.0 426,445 + SGL_RS03900 0.43 +0.4
Or see this region's nucleotide sequence