Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02820 and SGL_RS02825 are separated by 208 nucleotides SGL_RS02825 and SGL_RS02830 are separated by 252 nucleotides SGL_RS02830 and SGL_RS02835 are separated by 9 nucleotides
SGL_RS02820: SGL_RS02820 - EAL domain-containing protein, at 202,554 to 204,395
_RS02820
SGL_RS02825: SGL_RS02825 - translational GTPase TypA, at 204,604 to 206,397
_RS02825
SGL_RS02830: SGL_RS02830 - hypothetical protein, at 206,650 to 206,853
_RS02830
SGL_RS02835: SGL_RS02835 - TAXI family TRAP transporter solute-binding subunit, at 206,863 to 208,392
_RS02835
Position (kb) 204
205
206
207 Strain fitness (log2 ratio) -1
0
1
2 at 203.957 kb on + strand, within SGL_RS02820 at 204.093 kb on + strand, within SGL_RS02820 at 204.102 kb on - strand, within SGL_RS02820 at 204.263 kb on - strand at 204.322 kb on + strand at 204.552 kb on - strand at 204.552 kb on - strand at 204.714 kb on - strand at 204.733 kb on - strand at 204.735 kb on + strand at 204.759 kb on + strand at 204.884 kb on + strand, within SGL_RS02825 at 204.885 kb on - strand, within SGL_RS02825 at 204.892 kb on - strand, within SGL_RS02825 at 204.892 kb on - strand, within SGL_RS02825 at 204.962 kb on - strand, within SGL_RS02825 at 205.019 kb on - strand, within SGL_RS02825 at 205.053 kb on + strand, within SGL_RS02825 at 205.098 kb on - strand, within SGL_RS02825 at 205.206 kb on + strand, within SGL_RS02825 at 205.418 kb on + strand, within SGL_RS02825 at 205.426 kb on - strand, within SGL_RS02825 at 205.461 kb on + strand, within SGL_RS02825 at 205.490 kb on - strand, within SGL_RS02825 at 205.750 kb on + strand, within SGL_RS02825 at 205.784 kb on - strand, within SGL_RS02825 at 206.091 kb on + strand, within SGL_RS02825 at 206.195 kb on + strand, within SGL_RS02825 at 206.195 kb on + strand, within SGL_RS02825 at 206.203 kb on - strand, within SGL_RS02825 at 206.861 kb on + strand at 206.906 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 203,957 + SGL_RS02820 0.76 -1.3 204,093 + SGL_RS02820 0.84 -0.3 204,102 - SGL_RS02820 0.84 -1.3 204,263 - -0.3 204,322 + -1.2 204,552 - +0.6 204,552 - +0.2 204,714 - +1.6 204,733 - +1.7 204,735 + +2.3 204,759 + +1.7 204,884 + SGL_RS02825 0.16 +2.0 204,885 - SGL_RS02825 0.16 +1.9 204,892 - SGL_RS02825 0.16 +2.2 204,892 - SGL_RS02825 0.16 +2.1 204,962 - SGL_RS02825 0.20 +1.7 205,019 - SGL_RS02825 0.23 +2.4 205,053 + SGL_RS02825 0.25 +0.9 205,098 - SGL_RS02825 0.28 +1.2 205,206 + SGL_RS02825 0.34 +2.0 205,418 + SGL_RS02825 0.45 +2.2 205,426 - SGL_RS02825 0.46 +2.3 205,461 + SGL_RS02825 0.48 +2.2 205,490 - SGL_RS02825 0.49 +1.4 205,750 + SGL_RS02825 0.64 +1.7 205,784 - SGL_RS02825 0.66 +1.9 206,091 + SGL_RS02825 0.83 +2.3 206,195 + SGL_RS02825 0.89 +2.1 206,195 + SGL_RS02825 0.89 +2.2 206,203 - SGL_RS02825 0.89 +2.2 206,861 + +0.1 206,906 + +0.0
Or see this region's nucleotide sequence