Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02340 and SGL_RS02345 are separated by 78 nucleotides SGL_RS02345 and SGL_RS02350 are separated by 83 nucleotides SGL_RS02350 and SGL_RS02355 are separated by 363 nucleotides
SGL_RS02340: SGL_RS02340 - hypothetical protein, at 109,222 to 110,313
_RS02340
SGL_RS02345: SGL_RS02345 - type II toxin-antitoxin system PrlF family antitoxin, at 110,392 to 110,724
_RS02345
SGL_RS02350: SGL_RS02350 - type II toxin-antitoxin system YhaV family toxin, at 110,808 to 111,224
_RS02350
SGL_RS02355: SGL_RS02355 - hypothetical protein, at 111,588 to 112,559
_RS02355
Position (kb) 110
111 Strain fitness (log2 ratio) -1
0
1
2
3 at 109.479 kb on - strand, within SGL_RS02340 at 109.479 kb on - strand, within SGL_RS02340 at 109.497 kb on + strand, within SGL_RS02340 at 109.505 kb on - strand, within SGL_RS02340 at 109.505 kb on - strand, within SGL_RS02340 at 109.550 kb on - strand, within SGL_RS02340 at 109.608 kb on + strand, within SGL_RS02340 at 109.608 kb on + strand, within SGL_RS02340 at 109.608 kb on + strand, within SGL_RS02340 at 109.608 kb on + strand, within SGL_RS02340 at 109.608 kb on + strand, within SGL_RS02340 at 109.608 kb on + strand, within SGL_RS02340 at 109.616 kb on - strand, within SGL_RS02340 at 109.616 kb on - strand, within SGL_RS02340 at 109.616 kb on - strand, within SGL_RS02340 at 109.966 kb on - strand, within SGL_RS02340 at 110.044 kb on + strand, within SGL_RS02340 at 110.052 kb on - strand, within SGL_RS02340 at 110.064 kb on - strand, within SGL_RS02340 at 110.069 kb on - strand, within SGL_RS02340 at 110.157 kb on + strand, within SGL_RS02340 at 110.165 kb on - strand, within SGL_RS02340 at 110.212 kb on - strand at 110.278 kb on + strand at 110.279 kb on - strand at 110.327 kb on - strand at 110.382 kb on + strand at 110.481 kb on - strand, within SGL_RS02345 at 110.551 kb on - strand, within SGL_RS02345 at 110.609 kb on - strand, within SGL_RS02345 at 110.647 kb on - strand, within SGL_RS02345 at 110.759 kb on + strand at 110.907 kb on + strand, within SGL_RS02350 at 111.105 kb on + strand, within SGL_RS02350 at 111.181 kb on - strand, within SGL_RS02350 at 111.519 kb on - strand at 111.584 kb on + strand at 111.687 kb on + strand, within SGL_RS02355
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 109,479 - SGL_RS02340 0.24 +0.3 109,479 - SGL_RS02340 0.24 +0.1 109,497 + SGL_RS02340 0.25 +0.1 109,505 - SGL_RS02340 0.26 +0.0 109,505 - SGL_RS02340 0.26 +1.1 109,550 - SGL_RS02340 0.30 -0.4 109,608 + SGL_RS02340 0.35 -0.5 109,608 + SGL_RS02340 0.35 +0.3 109,608 + SGL_RS02340 0.35 -0.1 109,608 + SGL_RS02340 0.35 +0.4 109,608 + SGL_RS02340 0.35 +0.9 109,608 + SGL_RS02340 0.35 +0.0 109,616 - SGL_RS02340 0.36 -0.6 109,616 - SGL_RS02340 0.36 -0.2 109,616 - SGL_RS02340 0.36 +0.4 109,966 - SGL_RS02340 0.68 +0.2 110,044 + SGL_RS02340 0.75 -0.5 110,052 - SGL_RS02340 0.76 +0.3 110,064 - SGL_RS02340 0.77 -0.4 110,069 - SGL_RS02340 0.78 -0.5 110,157 + SGL_RS02340 0.86 -0.0 110,165 - SGL_RS02340 0.86 +0.5 110,212 - -0.2 110,278 + -0.3 110,279 - -0.1 110,327 - +0.2 110,382 + +0.7 110,481 - SGL_RS02345 0.27 +0.5 110,551 - SGL_RS02345 0.48 +2.4 110,609 - SGL_RS02345 0.65 +2.3 110,647 - SGL_RS02345 0.77 +3.2 110,759 + -0.3 110,907 + SGL_RS02350 0.24 -0.1 111,105 + SGL_RS02350 0.71 +0.4 111,181 - SGL_RS02350 0.89 -0.1 111,519 - +0.2 111,584 + -0.1 111,687 + SGL_RS02355 0.10 +0.1
Or see this region's nucleotide sequence