Experiment: Nickel (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS00355 and SGL_RS00360 are separated by 203 nucleotides SGL_RS00360 and SGL_RS00365 are separated by 112 nucleotides
SGL_RS00355: SGL_RS00355 - ion channel, at 76,050 to 76,988
_RS00355
SGL_RS00360: SGL_RS00360 - glucose 1-dehydrogenase, at 77,192 to 77,944
_RS00360
SGL_RS00365: SGL_RS00365 - alpha/beta hydrolase, at 78,057 to 78,881
_RS00365
Position (kb) 77
78 Strain fitness (log2 ratio) -2
-1
0
1 at 76.513 kb on + strand, within SGL_RS00355 at 76.523 kb on - strand, within SGL_RS00355 at 76.848 kb on + strand, within SGL_RS00355 at 76.887 kb on - strand, within SGL_RS00355 at 77.124 kb on - strand at 77.149 kb on - strand at 77.173 kb on + strand at 77.185 kb on + strand at 77.193 kb on - strand at 77.213 kb on - strand at 77.355 kb on + strand, within SGL_RS00360 at 77.389 kb on + strand, within SGL_RS00360 at 77.420 kb on + strand, within SGL_RS00360 at 77.428 kb on - strand, within SGL_RS00360 at 77.428 kb on - strand, within SGL_RS00360 at 77.576 kb on + strand, within SGL_RS00360 at 77.827 kb on - strand, within SGL_RS00360 at 77.852 kb on + strand, within SGL_RS00360 at 77.987 kb on + strand at 77.989 kb on + strand at 78.085 kb on + strand at 78.103 kb on - strand at 78.110 kb on + strand at 78.133 kb on + strand at 78.164 kb on + strand, within SGL_RS00365 at 78.326 kb on - strand, within SGL_RS00365 at 78.523 kb on + strand, within SGL_RS00365 at 78.525 kb on + strand, within SGL_RS00365 at 78.533 kb on - strand, within SGL_RS00365 at 78.589 kb on - strand, within SGL_RS00365 at 78.705 kb on + strand, within SGL_RS00365 at 78.770 kb on + strand, within SGL_RS00365 at 78.787 kb on + strand, within SGL_RS00365 at 78.834 kb on - strand at 78.836 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 5 uM remove 76,513 + SGL_RS00355 0.49 +0.1 76,523 - SGL_RS00355 0.50 +0.2 76,848 + SGL_RS00355 0.85 -0.3 76,887 - SGL_RS00355 0.89 +0.4 77,124 - -0.1 77,149 - -2.3 77,173 + +0.3 77,185 + -0.1 77,193 - +0.2 77,213 - -0.7 77,355 + SGL_RS00360 0.22 +0.1 77,389 + SGL_RS00360 0.26 -0.3 77,420 + SGL_RS00360 0.30 -1.6 77,428 - SGL_RS00360 0.31 -0.3 77,428 - SGL_RS00360 0.31 -0.2 77,576 + SGL_RS00360 0.51 +0.2 77,827 - SGL_RS00360 0.84 -0.6 77,852 + SGL_RS00360 0.88 -0.9 77,987 + +0.0 77,989 + -0.1 78,085 + -1.1 78,103 - -0.4 78,110 + -1.1 78,133 + +0.1 78,164 + SGL_RS00365 0.13 +0.7 78,326 - SGL_RS00365 0.33 -0.0 78,523 + SGL_RS00365 0.56 -0.7 78,525 + SGL_RS00365 0.57 +0.2 78,533 - SGL_RS00365 0.58 +0.5 78,589 - SGL_RS00365 0.64 -0.1 78,705 + SGL_RS00365 0.79 -0.4 78,770 + SGL_RS00365 0.86 -1.4 78,787 + SGL_RS00365 0.88 -0.5 78,834 - +0.1 78,836 - +0.0
Or see this region's nucleotide sequence