Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS17795 and SGL_RS17800 are separated by 331 nucleotides SGL_RS17800 and SGL_RS17805 are separated by 48 nucleotides
SGL_RS17795: SGL_RS17795 - peptidase domain-containing ABC transporter, at 3,449,979 to 3,452,129
_RS17795
SGL_RS17800: SGL_RS17800 - phytol kinase, at 3,452,461 to 3,453,162
_RS17800
SGL_RS17805: SGL_RS17805 - M20 family metallopeptidase, at 3,453,211 to 3,454,425
_RS17805
Position (kb)
3452
3453
3454 Strain fitness (log2 ratio)
-2
-1
0
1 at 3451.957 kb on - strand at 3452.013 kb on - strand at 3452.233 kb on - strand at 3452.507 kb on - strand at 3452.627 kb on - strand, within SGL_RS17800 at 3452.709 kb on + strand, within SGL_RS17800 at 3452.743 kb on - strand, within SGL_RS17800 at 3452.898 kb on - strand, within SGL_RS17800 at 3453.013 kb on - strand, within SGL_RS17800 at 3453.059 kb on + strand, within SGL_RS17800 at 3453.062 kb on - strand, within SGL_RS17800 at 3453.067 kb on - strand, within SGL_RS17800 at 3453.106 kb on - strand at 3453.114 kb on + strand at 3453.114 kb on + strand at 3453.157 kb on + strand at 3453.165 kb on - strand at 3453.171 kb on - strand at 3453.221 kb on - strand at 3453.353 kb on - strand, within SGL_RS17805 at 3453.372 kb on - strand, within SGL_RS17805 at 3453.406 kb on - strand, within SGL_RS17805 at 3453.406 kb on - strand, within SGL_RS17805 at 3453.452 kb on + strand, within SGL_RS17805 at 3453.525 kb on + strand, within SGL_RS17805 at 3453.579 kb on - strand, within SGL_RS17805 at 3453.655 kb on + strand, within SGL_RS17805 at 3453.661 kb on + strand, within SGL_RS17805 at 3453.669 kb on - strand, within SGL_RS17805 at 3453.670 kb on - strand, within SGL_RS17805 at 3453.717 kb on + strand, within SGL_RS17805 at 3453.756 kb on - strand, within SGL_RS17805 at 3453.817 kb on + strand, within SGL_RS17805 at 3453.825 kb on - strand, within SGL_RS17805 at 3453.908 kb on + strand, within SGL_RS17805 at 3453.908 kb on + strand, within SGL_RS17805 at 3453.908 kb on + strand, within SGL_RS17805 at 3453.923 kb on + strand, within SGL_RS17805 at 3453.923 kb on + strand, within SGL_RS17805 at 3453.933 kb on + strand, within SGL_RS17805 at 3453.951 kb on - strand, within SGL_RS17805 at 3454.036 kb on - strand, within SGL_RS17805 at 3454.036 kb on - strand, within SGL_RS17805 at 3454.064 kb on + strand, within SGL_RS17805
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 3 uM remove 3,451,957 - +0.3 3,452,013 - -0.3 3,452,233 - -2.2 3,452,507 - +0.6 3,452,627 - SGL_RS17800 0.24 +0.8 3,452,709 + SGL_RS17800 0.35 +0.8 3,452,743 - SGL_RS17800 0.40 +0.3 3,452,898 - SGL_RS17800 0.62 +0.3 3,453,013 - SGL_RS17800 0.79 -0.4 3,453,059 + SGL_RS17800 0.85 +0.9 3,453,062 - SGL_RS17800 0.86 +0.6 3,453,067 - SGL_RS17800 0.86 +1.2 3,453,106 - +0.1 3,453,114 + +0.5 3,453,114 + +1.4 3,453,157 + +0.3 3,453,165 - -0.0 3,453,171 - -0.0 3,453,221 - +0.1 3,453,353 - SGL_RS17805 0.12 +0.6 3,453,372 - SGL_RS17805 0.13 -0.0 3,453,406 - SGL_RS17805 0.16 +0.5 3,453,406 - SGL_RS17805 0.16 +0.4 3,453,452 + SGL_RS17805 0.20 +0.3 3,453,525 + SGL_RS17805 0.26 +0.3 3,453,579 - SGL_RS17805 0.30 -1.9 3,453,655 + SGL_RS17805 0.37 +0.0 3,453,661 + SGL_RS17805 0.37 +0.6 3,453,669 - SGL_RS17805 0.38 +0.5 3,453,670 - SGL_RS17805 0.38 +0.3 3,453,717 + SGL_RS17805 0.42 +1.5 3,453,756 - SGL_RS17805 0.45 +0.3 3,453,817 + SGL_RS17805 0.50 +0.6 3,453,825 - SGL_RS17805 0.51 +0.3 3,453,908 + SGL_RS17805 0.57 +0.2 3,453,908 + SGL_RS17805 0.57 -0.4 3,453,908 + SGL_RS17805 0.57 +0.0 3,453,923 + SGL_RS17805 0.59 +0.8 3,453,923 + SGL_RS17805 0.59 +1.0 3,453,933 + SGL_RS17805 0.59 -0.5 3,453,951 - SGL_RS17805 0.61 +0.1 3,454,036 - SGL_RS17805 0.68 -0.0 3,454,036 - SGL_RS17805 0.68 +0.7 3,454,064 + SGL_RS17805 0.70 +0.8
Or see this region's nucleotide sequence