Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14485 and SGL_RS14490 are separated by 147 nucleotides SGL_RS14490 and SGL_RS14495 are separated by 749 nucleotides
SGL_RS14485: SGL_RS14485 - transcription-repair coupling factor, at 2,701,931 to 2,705,530
_RS14485
SGL_RS14490: SGL_RS14490 - hypothetical protein, at 2,705,678 to 2,705,983
_RS14490
SGL_RS14495: SGL_RS14495 - septal ring lytic transglycosylase RlpA family protein, at 2,706,733 to 2,707,698
_RS14495
Position (kb)
2705
2706 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2704.819 kb on - strand, within SGL_RS14485 at 2704.887 kb on + strand, within SGL_RS14485 at 2704.889 kb on + strand, within SGL_RS14485 at 2704.909 kb on + strand, within SGL_RS14485 at 2704.956 kb on - strand, within SGL_RS14485 at 2705.067 kb on + strand, within SGL_RS14485 at 2705.067 kb on + strand, within SGL_RS14485 at 2705.075 kb on - strand, within SGL_RS14485 at 2705.085 kb on - strand, within SGL_RS14485 at 2705.145 kb on + strand, within SGL_RS14485 at 2705.169 kb on - strand, within SGL_RS14485 at 2705.225 kb on - strand at 2705.301 kb on - strand at 2705.385 kb on - strand at 2705.423 kb on + strand at 2705.423 kb on + strand at 2705.431 kb on - strand at 2705.436 kb on - strand at 2705.514 kb on + strand at 2705.514 kb on + strand at 2705.514 kb on + strand at 2705.522 kb on - strand at 2705.522 kb on - strand at 2705.522 kb on - strand at 2705.522 kb on - strand at 2705.522 kb on - strand at 2705.780 kb on + strand, within SGL_RS14490 at 2705.788 kb on - strand, within SGL_RS14490 at 2705.897 kb on - strand, within SGL_RS14490 at 2705.977 kb on + strand at 2706.088 kb on + strand at 2706.189 kb on - strand at 2706.639 kb on - strand at 2706.641 kb on + strand at 2706.649 kb on - strand at 2706.649 kb on - strand at 2706.903 kb on - strand, within SGL_RS14495
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 3 uM remove 2,704,819 - SGL_RS14485 0.80 +0.5 2,704,887 + SGL_RS14485 0.82 +1.0 2,704,889 + SGL_RS14485 0.82 +0.9 2,704,909 + SGL_RS14485 0.83 +0.9 2,704,956 - SGL_RS14485 0.84 +1.0 2,705,067 + SGL_RS14485 0.87 +0.4 2,705,067 + SGL_RS14485 0.87 +0.0 2,705,075 - SGL_RS14485 0.87 +0.8 2,705,085 - SGL_RS14485 0.88 +0.4 2,705,145 + SGL_RS14485 0.89 +0.5 2,705,169 - SGL_RS14485 0.90 +0.6 2,705,225 - -0.1 2,705,301 - +1.0 2,705,385 - +0.8 2,705,423 + +0.1 2,705,423 + +0.6 2,705,431 - +0.7 2,705,436 - +0.8 2,705,514 + +0.4 2,705,514 + +0.3 2,705,514 + -0.0 2,705,522 - +0.3 2,705,522 - +1.0 2,705,522 - -0.5 2,705,522 - +0.7 2,705,522 - +0.5 2,705,780 + SGL_RS14490 0.33 -0.6 2,705,788 - SGL_RS14490 0.36 -4.1 2,705,897 - SGL_RS14490 0.72 -1.0 2,705,977 + -0.6 2,706,088 + -0.2 2,706,189 - +1.1 2,706,639 - +0.3 2,706,641 + +0.4 2,706,649 - +1.2 2,706,649 - +0.4 2,706,903 - SGL_RS14495 0.18 +0.5
Or see this region's nucleotide sequence