Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS13855 and SGL_RS13860 are separated by 99 nucleotides SGL_RS13860 and SGL_RS13865 are separated by 229 nucleotides SGL_RS13865 and SGL_RS13870 are separated by 4 nucleotides SGL_RS13870 and SGL_RS13875 are separated by 64 nucleotides
SGL_RS13855: SGL_RS13855 - hypothetical protein, at 2,574,297 to 2,575,244
_RS13855
SGL_RS13860: SGL_RS13860 - acetolactate synthase small subunit, at 2,575,344 to 2,575,862
_RS13860
SGL_RS13865: SGL_RS13865 - DUF3285 domain-containing protein, at 2,576,092 to 2,576,280
_RS13865
SGL_RS13870: SGL_RS13870 - rRNA maturation RNase YbeY, at 2,576,285 to 2,576,824
_RS13870
SGL_RS13875: SGL_RS13875 - diacylglycerol kinase, at 2,576,889 to 2,577,416
_RS13875
Position (kb)
2576
2577 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2575.096 kb on + strand, within SGL_RS13855 at 2575.104 kb on - strand, within SGL_RS13855 at 2575.248 kb on - strand at 2575.273 kb on + strand at 2575.283 kb on + strand at 2575.604 kb on + strand, within SGL_RS13860 at 2576.003 kb on - strand at 2576.178 kb on + strand, within SGL_RS13865 at 2576.180 kb on + strand, within SGL_RS13865 at 2576.186 kb on - strand, within SGL_RS13865 at 2576.188 kb on - strand, within SGL_RS13865 at 2576.336 kb on + strand at 2576.369 kb on - strand, within SGL_RS13870 at 2576.423 kb on - strand, within SGL_RS13870 at 2576.425 kb on - strand, within SGL_RS13870 at 2576.532 kb on - strand, within SGL_RS13870 at 2576.532 kb on - strand, within SGL_RS13870 at 2576.631 kb on + strand, within SGL_RS13870 at 2576.687 kb on + strand, within SGL_RS13870 at 2576.716 kb on - strand, within SGL_RS13870 at 2576.885 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 3 uM remove 2,575,096 + SGL_RS13855 0.84 -0.3 2,575,104 - SGL_RS13855 0.85 -0.2 2,575,248 - +0.5 2,575,273 + -0.3 2,575,283 + -0.0 2,575,604 + SGL_RS13860 0.50 -2.3 2,576,003 - +1.0 2,576,178 + SGL_RS13865 0.46 -1.6 2,576,180 + SGL_RS13865 0.47 -1.6 2,576,186 - SGL_RS13865 0.50 -4.4 2,576,188 - SGL_RS13865 0.51 -0.7 2,576,336 + -3.7 2,576,369 - SGL_RS13870 0.16 -3.4 2,576,423 - SGL_RS13870 0.26 -4.9 2,576,425 - SGL_RS13870 0.26 -3.6 2,576,532 - SGL_RS13870 0.46 -2.5 2,576,532 - SGL_RS13870 0.46 -3.9 2,576,631 + SGL_RS13870 0.64 -4.5 2,576,687 + SGL_RS13870 0.74 -3.5 2,576,716 - SGL_RS13870 0.80 -3.5 2,576,885 - -3.7
Or see this region's nucleotide sequence