Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS13460
Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 3 uM |
---|---|---|---|---|---|
remove | |||||
2,485,666 | - | +1.5 | |||
2,485,682 | + | +2.2 | |||
2,485,690 | - | +1.3 | |||
2,485,690 | - | +1.2 | |||
2,485,714 | - | SGL_RS13455 | 0.12 | +0.8 | |
2,485,832 | - | SGL_RS13455 | 0.34 | +2.4 | |
2,485,834 | + | SGL_RS13455 | 0.34 | +1.8 | |
2,485,957 | - | SGL_RS13455 | 0.57 | +1.6 | |
2,486,223 | + | -0.3 | |||
2,486,310 | - | -1.9 | |||
2,487,906 | - | -2.7 | |||
2,488,059 | + | -2.7 | |||
2,488,090 | + | -5.4 | |||
2,488,445 | - | SGL_RS13465 | 0.30 | -5.9 | |
2,488,541 | - | SGL_RS13465 | 0.37 | -4.6 | |
2,488,541 | - | SGL_RS13465 | 0.37 | -5.9 | |
2,488,728 | + | SGL_RS13465 | 0.50 | -6.7 | |
2,488,735 | + | SGL_RS13465 | 0.50 | -6.1 | |
2,488,741 | - | SGL_RS13465 | 0.51 | -6.0 | |
2,488,741 | - | SGL_RS13465 | 0.51 | -6.2 |
Or see this region's nucleotide sequence