Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS09815 and SGL_RS09820 are separated by 53 nucleotides SGL_RS09820 and SGL_RS09825 are separated by 134 nucleotides
SGL_RS09815: SGL_RS09815 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 1,688,213 to 1,689,259
_RS09815
SGL_RS09820: SGL_RS09820 - ribosome maturation factor RimM, at 1,689,313 to 1,689,870
_RS09820
SGL_RS09825: SGL_RS09825 - SDR family oxidoreductase, at 1,690,005 to 1,690,934
_RS09825
Position (kb) 1689
1690 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 1688.370 kb on - strand, within SGL_RS09815 at 1688.393 kb on - strand, within SGL_RS09815 at 1688.419 kb on - strand, within SGL_RS09815 at 1688.419 kb on - strand, within SGL_RS09815 at 1688.468 kb on - strand, within SGL_RS09815 at 1688.552 kb on + strand, within SGL_RS09815 at 1688.715 kb on + strand, within SGL_RS09815 at 1688.745 kb on - strand, within SGL_RS09815 at 1688.824 kb on + strand, within SGL_RS09815 at 1688.898 kb on + strand, within SGL_RS09815 at 1688.918 kb on - strand, within SGL_RS09815 at 1688.996 kb on + strand, within SGL_RS09815 at 1689.206 kb on + strand at 1689.321 kb on + strand at 1689.321 kb on + strand at 1689.387 kb on - strand, within SGL_RS09820 at 1689.539 kb on - strand, within SGL_RS09820 at 1689.598 kb on + strand, within SGL_RS09820 at 1689.967 kb on + strand at 1690.256 kb on + strand, within SGL_RS09825
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 3 uM remove 1,688,370 - SGL_RS09815 0.15 +0.0 1,688,393 - SGL_RS09815 0.17 -0.9 1,688,419 - SGL_RS09815 0.20 -0.0 1,688,419 - SGL_RS09815 0.20 -0.1 1,688,468 - SGL_RS09815 0.24 -0.1 1,688,552 + SGL_RS09815 0.32 +0.6 1,688,715 + SGL_RS09815 0.48 -0.1 1,688,745 - SGL_RS09815 0.51 +0.4 1,688,824 + SGL_RS09815 0.58 -0.8 1,688,898 + SGL_RS09815 0.65 +0.4 1,688,918 - SGL_RS09815 0.67 +0.6 1,688,996 + SGL_RS09815 0.75 -0.1 1,689,206 + -0.4 1,689,321 + -0.4 1,689,321 + +0.0 1,689,387 - SGL_RS09820 0.13 -5.3 1,689,539 - SGL_RS09820 0.41 -5.2 1,689,598 + SGL_RS09820 0.51 -4.5 1,689,967 + +0.9 1,690,256 + SGL_RS09825 0.27 -2.2
Or see this region's nucleotide sequence