Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS07575
Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 3 uM |
---|---|---|---|---|---|
remove | |||||
1,223,943 | + | SGL_RS07570 | 0.28 | -5.3 | |
1,224,246 | + | SGL_RS07570 | 0.59 | -3.6 | |
1,224,416 | - | SGL_RS07570 | 0.76 | -6.0 | |
1,224,429 | + | SGL_RS07570 | 0.78 | -5.5 | |
1,224,522 | + | SGL_RS07570 | 0.87 | -3.8 | |
1,224,569 | + | -5.6 | |||
1,224,579 | - | -5.7 | |||
1,226,003 | + | SGL_RS07580 | 0.12 | -3.3 | |
1,226,204 | + | SGL_RS07580 | 0.43 | -3.1 | |
1,226,204 | + | SGL_RS07580 | 0.43 | -3.3 | |
1,226,233 | - | SGL_RS07580 | 0.48 | -4.1 | |
1,226,233 | - | SGL_RS07580 | 0.48 | -2.6 | |
1,226,252 | - | SGL_RS07580 | 0.51 | -3.9 | |
1,226,313 | + | SGL_RS07580 | 0.60 | -3.1 | |
1,226,568 | + | +0.2 | |||
1,226,807 | + | SGL_RS07585 | 0.41 | +0.4 |
Or see this region's nucleotide sequence