Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS07285 and SGL_RS07290 overlap by 18 nucleotides SGL_RS07290 and SGL_RS07295 are separated by 180 nucleotides SGL_RS07295 and SGL_RS07300 are separated by 31 nucleotides
SGL_RS07285: SGL_RS07285 - N-acetylmuramoyl-L-alanine amidase, at 1,159,029 to 1,160,804
_RS07285
SGL_RS07290: SGL_RS07290 - M67 family metallopeptidase, at 1,160,787 to 1,161,260
_RS07290
SGL_RS07295: SGL_RS07295 - hypothetical protein, at 1,161,441 to 1,161,824
_RS07295
SGL_RS07300: SGL_RS07300 - site-2 protease family protein, at 1,161,856 to 1,163,367
_RS07300
Position (kb)
1161
1162 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3
4 at 1160.496 kb on + strand, within SGL_RS07285 at 1160.596 kb on - strand, within SGL_RS07285 at 1160.862 kb on - strand, within SGL_RS07290 at 1160.931 kb on - strand, within SGL_RS07290 at 1161.040 kb on - strand, within SGL_RS07290 at 1161.118 kb on - strand, within SGL_RS07290 at 1161.538 kb on + strand, within SGL_RS07295 at 1161.572 kb on - strand, within SGL_RS07295 at 1161.572 kb on - strand, within SGL_RS07295 at 1161.584 kb on + strand, within SGL_RS07295 at 1161.732 kb on + strand, within SGL_RS07295 at 1161.732 kb on + strand, within SGL_RS07295 at 1161.740 kb on - strand, within SGL_RS07295 at 1161.758 kb on - strand, within SGL_RS07295 at 1161.758 kb on - strand, within SGL_RS07295 at 1161.862 kb on + strand at 1161.874 kb on + strand at 1161.929 kb on - strand at 1161.983 kb on - strand at 1162.028 kb on + strand, within SGL_RS07300 at 1162.060 kb on - strand, within SGL_RS07300 at 1162.128 kb on - strand, within SGL_RS07300 at 1162.212 kb on - strand, within SGL_RS07300 at 1162.248 kb on - strand, within SGL_RS07300 at 1162.268 kb on - strand, within SGL_RS07300 at 1162.815 kb on - strand, within SGL_RS07300
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 3 uM remove 1,160,496 + SGL_RS07285 0.83 -5.0 1,160,596 - SGL_RS07285 0.88 -4.1 1,160,862 - SGL_RS07290 0.16 -0.0 1,160,931 - SGL_RS07290 0.30 +0.2 1,161,040 - SGL_RS07290 0.53 -0.1 1,161,118 - SGL_RS07290 0.70 +0.2 1,161,538 + SGL_RS07295 0.25 +1.4 1,161,572 - SGL_RS07295 0.34 +1.3 1,161,572 - SGL_RS07295 0.34 +1.0 1,161,584 + SGL_RS07295 0.37 +1.2 1,161,732 + SGL_RS07295 0.76 +1.3 1,161,732 + SGL_RS07295 0.76 +0.6 1,161,740 - SGL_RS07295 0.78 +1.1 1,161,758 - SGL_RS07295 0.83 +0.9 1,161,758 - SGL_RS07295 0.83 +1.5 1,161,862 + +1.8 1,161,874 + +1.5 1,161,929 - +1.9 1,161,983 - +3.0 1,162,028 + SGL_RS07300 0.11 +4.5 1,162,060 - SGL_RS07300 0.13 +2.1 1,162,128 - SGL_RS07300 0.18 +0.3 1,162,212 - SGL_RS07300 0.24 +1.8 1,162,248 - SGL_RS07300 0.26 +1.9 1,162,268 - SGL_RS07300 0.27 +1.7 1,162,815 - SGL_RS07300 0.63 +2.2
Or see this region's nucleotide sequence