Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS07170
Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 3 uM |
|---|---|---|---|---|---|
| remove | |||||
| 1,137,347 | + | SGL_RS07165 | 0.15 | -0.7 | |
| 1,137,347 | + | SGL_RS07165 | 0.15 | -1.0 | |
| 1,137,447 | + | SGL_RS07165 | 0.26 | -0.6 | |
| 1,137,485 | + | SGL_RS07165 | 0.30 | -1.4 | |
| 1,138,309 | + | SGL_RS07170 | 0.25 | -5.0 | |
| 1,138,385 | - | SGL_RS07170 | 0.44 | -1.6 | |
| 1,138,414 | + | SGL_RS07170 | 0.51 | -2.4 | |
| 1,138,578 | + | +0.8 | |||
| 1,138,589 | + | +0.5 | |||
| 1,138,623 | + | +0.6 | |||
| 1,138,623 | + | +0.6 | |||
| 1,138,723 | + | +1.0 | |||
| 1,138,746 | + | +1.5 | |||
| 1,138,804 | + | +0.9 | |||
| 1,138,877 | + | +1.3 | |||
| 1,138,947 | + | SGL_RS07175 | 0.14 | +1.2 | |
| 1,138,947 | + | SGL_RS07175 | 0.14 | +1.2 | |
| 1,138,955 | - | SGL_RS07175 | 0.14 | +1.5 | |
| 1,139,046 | - | SGL_RS07175 | 0.19 | +1.8 | |
| 1,139,138 | - | SGL_RS07175 | 0.25 | +1.9 | |
| 1,139,192 | - | SGL_RS07175 | 0.28 | +1.5 | |
| 1,139,317 | - | SGL_RS07175 | 0.35 | +1.4 | |
| 1,139,477 | - | SGL_RS07175 | 0.44 | +1.1 | |
| 1,139,508 | + | SGL_RS07175 | 0.45 | +1.1 |
Or see this region's nucleotide sequence