Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS07040
Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Nickel (II) sulfate 3 uM |
|---|---|---|---|---|---|
| remove | |||||
| 1,104,100 | - | -0.7 | |||
| 1,104,179 | + | +0.4 | |||
| 1,104,194 | - | +0.6 | |||
| 1,104,278 | + | +1.7 | |||
| 1,104,298 | + | SGL_RS07040 | 0.13 | +1.4 | |
| 1,104,338 | - | SGL_RS07040 | 0.23 | +1.5 | |
| 1,104,398 | + | SGL_RS07040 | 0.38 | +2.1 | |
| 1,104,406 | - | SGL_RS07040 | 0.40 | +1.6 | |
| 1,104,474 | - | SGL_RS07040 | 0.57 | +1.4 | |
| 1,104,591 | + | SGL_RS07040 | 0.86 | +1.1 | |
| 1,104,860 | + | -0.5 | |||
| 1,105,129 | - | SGL_RS07045 | 0.19 | -0.3 | |
| 1,105,151 | + | SGL_RS07045 | 0.23 | +0.7 | |
| 1,105,164 | + | SGL_RS07045 | 0.26 | -2.3 | |
| 1,105,182 | - | SGL_RS07045 | 0.29 | -0.3 | |
| 1,105,220 | + | SGL_RS07045 | 0.37 | -0.3 | |
| 1,105,275 | + | SGL_RS07045 | 0.47 | -0.6 | |
| 1,105,280 | + | SGL_RS07045 | 0.48 | +0.3 | |
| 1,105,288 | - | SGL_RS07045 | 0.50 | -0.4 | |
| 1,105,291 | + | SGL_RS07045 | 0.51 | -0.6 | |
| 1,105,291 | + | SGL_RS07045 | 0.51 | -0.4 | |
| 1,105,454 | - | SGL_RS07045 | 0.82 | -0.5 | |
| 1,105,462 | + | SGL_RS07045 | 0.84 | -1.1 | |
| 1,105,633 | - | +0.1 |
Or see this region's nucleotide sequence