Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06670 and SGL_RS06675 are separated by 68 nucleotides SGL_RS06675 and SGL_RS06680 are separated by 106 nucleotides
SGL_RS06670: SGL_RS06670 - TIGR01777 family oxidoreductase, at 1,025,519 to 1,026,442
_RS06670
SGL_RS06675: SGL_RS06675 - ABC transporter ATP-binding protein, at 1,026,511 to 1,027,737
_RS06675
SGL_RS06680: SGL_RS06680 - serine/threonine-protein kinase, at 1,027,844 to 1,029,331
_RS06680
Position (kb)
1026
1027
1028 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1025.590 kb on - strand at 1025.616 kb on + strand, within SGL_RS06670 at 1025.628 kb on - strand, within SGL_RS06670 at 1025.703 kb on + strand, within SGL_RS06670 at 1025.974 kb on + strand, within SGL_RS06670 at 1026.038 kb on + strand, within SGL_RS06670 at 1026.082 kb on + strand, within SGL_RS06670 at 1026.114 kb on + strand, within SGL_RS06670 at 1026.225 kb on - strand, within SGL_RS06670 at 1026.263 kb on + strand, within SGL_RS06670 at 1026.456 kb on - strand at 1026.597 kb on + strand at 1026.811 kb on - strand, within SGL_RS06675 at 1026.817 kb on + strand, within SGL_RS06675 at 1026.896 kb on + strand, within SGL_RS06675 at 1027.087 kb on - strand, within SGL_RS06675 at 1027.239 kb on + strand, within SGL_RS06675 at 1027.304 kb on - strand, within SGL_RS06675 at 1027.349 kb on + strand, within SGL_RS06675 at 1027.511 kb on + strand, within SGL_RS06675 at 1027.906 kb on + strand at 1027.923 kb on + strand at 1027.925 kb on + strand at 1027.994 kb on + strand, within SGL_RS06680 at 1028.021 kb on + strand, within SGL_RS06680 at 1028.220 kb on - strand, within SGL_RS06680 at 1028.489 kb on + strand, within SGL_RS06680 at 1028.574 kb on - strand, within SGL_RS06680 at 1028.590 kb on - strand, within SGL_RS06680 at 1028.730 kb on - strand, within SGL_RS06680
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 3 uM remove 1,025,590 - -0.0 1,025,616 + SGL_RS06670 0.10 +2.0 1,025,628 - SGL_RS06670 0.12 -0.3 1,025,703 + SGL_RS06670 0.20 +0.4 1,025,974 + SGL_RS06670 0.49 +0.8 1,026,038 + SGL_RS06670 0.56 +0.7 1,026,082 + SGL_RS06670 0.61 +0.7 1,026,114 + SGL_RS06670 0.64 -0.5 1,026,225 - SGL_RS06670 0.76 +0.3 1,026,263 + SGL_RS06670 0.81 -1.5 1,026,456 - -1.9 1,026,597 + -2.7 1,026,811 - SGL_RS06675 0.24 -4.1 1,026,817 + SGL_RS06675 0.25 -4.9 1,026,896 + SGL_RS06675 0.31 -3.5 1,027,087 - SGL_RS06675 0.47 -4.1 1,027,239 + SGL_RS06675 0.59 -3.9 1,027,304 - SGL_RS06675 0.65 -5.2 1,027,349 + SGL_RS06675 0.68 -4.1 1,027,511 + SGL_RS06675 0.81 -4.4 1,027,906 + -0.4 1,027,923 + +0.7 1,027,925 + -0.1 1,027,994 + SGL_RS06680 0.10 -0.1 1,028,021 + SGL_RS06680 0.12 -0.0 1,028,220 - SGL_RS06680 0.25 -0.4 1,028,489 + SGL_RS06680 0.43 +0.6 1,028,574 - SGL_RS06680 0.49 -0.2 1,028,590 - SGL_RS06680 0.50 -0.2 1,028,730 - SGL_RS06680 0.60 +0.2
Or see this region's nucleotide sequence