Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS05310 and SGL_RS05315 are separated by 100 nucleotides SGL_RS05315 and SGL_RS05320 are separated by 68 nucleotides SGL_RS05320 and SGL_RS05325 are separated by 148 nucleotides SGL_RS05325 and SGL_RS05330 are separated by 91 nucleotides
SGL_RS05310: SGL_RS05310 - hypothetical protein, at 737,867 to 738,808
_RS05310
SGL_RS05315: SGL_RS05315 - hypothetical protein, at 738,909 to 739,613
_RS05315
SGL_RS05320: SGL_RS05320 - PBP1A family penicillin-binding protein, at 739,682 to 741,931
_RS05320
SGL_RS05325: SGL_RS05325 - PAP/fibrillin family protein, at 742,080 to 742,688
_RS05325
SGL_RS05330: SGL_RS05330 - ABC transporter ATP-binding protein, at 742,780 to 744,732
_RS05330
Position (kb) 739
740
741
742 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 738.714 kb on + strand at 738.735 kb on + strand at 738.762 kb on - strand at 738.944 kb on + strand at 738.964 kb on - strand at 738.985 kb on + strand, within SGL_RS05315 at 739.036 kb on - strand, within SGL_RS05315 at 739.183 kb on + strand, within SGL_RS05315 at 739.193 kb on + strand, within SGL_RS05315 at 739.217 kb on + strand, within SGL_RS05315 at 739.368 kb on - strand, within SGL_RS05315 at 739.448 kb on - strand, within SGL_RS05315 at 739.483 kb on + strand, within SGL_RS05315 at 739.521 kb on + strand, within SGL_RS05315 at 739.529 kb on - strand, within SGL_RS05315 at 739.530 kb on + strand, within SGL_RS05315 at 739.760 kb on + strand at 739.921 kb on + strand, within SGL_RS05320 at 739.944 kb on + strand, within SGL_RS05320 at 740.108 kb on + strand, within SGL_RS05320 at 740.236 kb on - strand, within SGL_RS05320 at 740.405 kb on + strand, within SGL_RS05320 at 740.405 kb on + strand, within SGL_RS05320 at 740.409 kb on - strand, within SGL_RS05320 at 740.413 kb on - strand, within SGL_RS05320 at 740.466 kb on + strand, within SGL_RS05320 at 740.474 kb on - strand, within SGL_RS05320 at 740.507 kb on - strand, within SGL_RS05320 at 740.637 kb on + strand, within SGL_RS05320 at 740.714 kb on - strand, within SGL_RS05320 at 740.756 kb on + strand, within SGL_RS05320 at 740.871 kb on + strand, within SGL_RS05320 at 740.873 kb on - strand, within SGL_RS05320 at 740.873 kb on - strand, within SGL_RS05320 at 740.873 kb on - strand, within SGL_RS05320 at 740.876 kb on + strand, within SGL_RS05320 at 741.086 kb on - strand, within SGL_RS05320 at 741.374 kb on - strand, within SGL_RS05320 at 741.507 kb on - strand, within SGL_RS05320 at 741.562 kb on + strand, within SGL_RS05320 at 741.562 kb on + strand, within SGL_RS05320 at 741.590 kb on - strand, within SGL_RS05320 at 741.625 kb on + strand, within SGL_RS05320 at 741.907 kb on - strand at 741.973 kb on - strand at 742.043 kb on - strand at 742.095 kb on + strand at 742.176 kb on - strand, within SGL_RS05325 at 742.217 kb on - strand, within SGL_RS05325 at 742.275 kb on + strand, within SGL_RS05325 at 742.397 kb on + strand, within SGL_RS05325 at 742.405 kb on - strand, within SGL_RS05325 at 742.464 kb on + strand, within SGL_RS05325 at 742.486 kb on + strand, within SGL_RS05325 at 742.554 kb on - strand, within SGL_RS05325 at 742.678 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 3 uM remove 738,714 + +0.1 738,735 + -0.2 738,762 - +0.2 738,944 + +0.1 738,964 - -0.1 738,985 + SGL_RS05315 0.11 +0.6 739,036 - SGL_RS05315 0.18 -0.1 739,183 + SGL_RS05315 0.39 -0.3 739,193 + SGL_RS05315 0.40 -0.4 739,217 + SGL_RS05315 0.44 +0.2 739,368 - SGL_RS05315 0.65 +0.3 739,448 - SGL_RS05315 0.76 +0.7 739,483 + SGL_RS05315 0.81 +1.1 739,521 + SGL_RS05315 0.87 +0.3 739,529 - SGL_RS05315 0.88 +0.7 739,530 + SGL_RS05315 0.88 -0.4 739,760 + -3.8 739,921 + SGL_RS05320 0.11 -3.1 739,944 + SGL_RS05320 0.12 -4.8 740,108 + SGL_RS05320 0.19 -4.8 740,236 - SGL_RS05320 0.25 -4.7 740,405 + SGL_RS05320 0.32 -1.9 740,405 + SGL_RS05320 0.32 -1.3 740,409 - SGL_RS05320 0.32 -6.0 740,413 - SGL_RS05320 0.32 -3.9 740,466 + SGL_RS05320 0.35 -5.9 740,474 - SGL_RS05320 0.35 -5.1 740,507 - SGL_RS05320 0.37 -4.4 740,637 + SGL_RS05320 0.42 -3.5 740,714 - SGL_RS05320 0.46 -5.6 740,756 + SGL_RS05320 0.48 -3.6 740,871 + SGL_RS05320 0.53 -4.3 740,873 - SGL_RS05320 0.53 -4.8 740,873 - SGL_RS05320 0.53 -4.4 740,873 - SGL_RS05320 0.53 -5.2 740,876 + SGL_RS05320 0.53 -3.1 741,086 - SGL_RS05320 0.62 -2.4 741,374 - SGL_RS05320 0.75 -5.2 741,507 - SGL_RS05320 0.81 -4.5 741,562 + SGL_RS05320 0.84 -4.8 741,562 + SGL_RS05320 0.84 -2.7 741,590 - SGL_RS05320 0.85 -3.1 741,625 + SGL_RS05320 0.86 -2.4 741,907 - -1.9 741,973 - -0.3 742,043 - +0.0 742,095 + -1.4 742,176 - SGL_RS05325 0.16 -1.0 742,217 - SGL_RS05325 0.22 -0.9 742,275 + SGL_RS05325 0.32 -1.0 742,397 + SGL_RS05325 0.52 -1.0 742,405 - SGL_RS05325 0.53 -0.3 742,464 + SGL_RS05325 0.63 -0.7 742,486 + SGL_RS05325 0.67 -1.0 742,554 - SGL_RS05325 0.78 -0.8 742,678 + -0.3
Or see this region's nucleotide sequence