Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS04660 and SGL_RS04665 are separated by 343 nucleotides SGL_RS04665 and SGL_RS04670 overlap by 4 nucleotides SGL_RS04670 and SGL_RS04675 are separated by 131 nucleotides
SGL_RS04660: SGL_RS04660 - phycobilisome rod-core linker polypeptide, at 596,498 to 597,247
_RS04660
SGL_RS04665: SGL_RS04665 - hypothetical protein, at 597,591 to 598,487
_RS04665
SGL_RS04670: SGL_RS04670 - hypothetical protein, at 598,484 to 598,930
_RS04670
SGL_RS04675: SGL_RS04675 - alpha/beta fold hydrolase, at 599,062 to 599,913
_RS04675
Position (kb) 597
598
599 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2
3 at 596.755 kb on + strand, within SGL_RS04660 at 597.002 kb on - strand, within SGL_RS04660 at 597.168 kb on + strand, within SGL_RS04660 at 597.263 kb on - strand at 597.358 kb on - strand at 597.558 kb on - strand at 597.587 kb on + strand at 597.637 kb on + strand at 597.637 kb on + strand at 597.939 kb on - strand, within SGL_RS04665 at 598.040 kb on + strand, within SGL_RS04665 at 598.087 kb on + strand, within SGL_RS04665 at 598.087 kb on + strand, within SGL_RS04665 at 598.253 kb on + strand, within SGL_RS04665 at 598.266 kb on + strand, within SGL_RS04665 at 598.274 kb on - strand, within SGL_RS04665 at 598.563 kb on + strand, within SGL_RS04670 at 598.576 kb on - strand, within SGL_RS04670 at 598.629 kb on - strand, within SGL_RS04670 at 598.901 kb on - strand at 598.911 kb on - strand at 599.019 kb on - strand at 599.039 kb on + strand at 599.113 kb on - strand at 599.225 kb on + strand, within SGL_RS04675 at 599.254 kb on + strand, within SGL_RS04675 at 599.420 kb on - strand, within SGL_RS04675 at 599.420 kb on - strand, within SGL_RS04675 at 599.420 kb on - strand, within SGL_RS04675 at 599.478 kb on + strand, within SGL_RS04675 at 599.478 kb on + strand, within SGL_RS04675 at 599.486 kb on - strand, within SGL_RS04675
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 3 uM remove 596,755 + SGL_RS04660 0.34 +0.3 597,002 - SGL_RS04660 0.67 +0.7 597,168 + SGL_RS04660 0.89 +2.2 597,263 - +3.0 597,358 - +1.0 597,558 - -6.2 597,587 + -4.4 597,637 + -5.3 597,637 + -3.6 597,939 - SGL_RS04665 0.39 -4.6 598,040 + SGL_RS04665 0.50 -6.3 598,087 + SGL_RS04665 0.55 -3.1 598,087 + SGL_RS04665 0.55 -3.4 598,253 + SGL_RS04665 0.74 -5.6 598,266 + SGL_RS04665 0.75 -3.0 598,274 - SGL_RS04665 0.76 -4.8 598,563 + SGL_RS04670 0.18 -1.3 598,576 - SGL_RS04670 0.21 -0.4 598,629 - SGL_RS04670 0.32 -0.8 598,901 - -1.1 598,911 - -0.3 599,019 - -0.1 599,039 + -0.2 599,113 - +0.8 599,225 + SGL_RS04675 0.19 +0.2 599,254 + SGL_RS04675 0.23 -0.6 599,420 - SGL_RS04675 0.42 +0.2 599,420 - SGL_RS04675 0.42 +0.1 599,420 - SGL_RS04675 0.42 +0.2 599,478 + SGL_RS04675 0.49 +0.6 599,478 + SGL_RS04675 0.49 +0.0 599,486 - SGL_RS04675 0.50 -0.0
Or see this region's nucleotide sequence