Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS04645 and SGL_RS04650 are separated by 210 nucleotides SGL_RS04650 and SGL_RS04655 are separated by 82 nucleotides SGL_RS04655 and SGL_RS04660 are separated by 186 nucleotides
SGL_RS04645: SGL_RS04645 - PhoH family protein, at 593,257 to 594,243
_RS04645
SGL_RS04650: SGL_RS04650 - tetratricopeptide repeat protein, at 594,454 to 595,650
_RS04650
SGL_RS04655: SGL_RS04655 - phycobiliprotein lyase, at 595,733 to 596,311
_RS04655
SGL_RS04660: SGL_RS04660 - phycobilisome rod-core linker polypeptide, at 596,498 to 597,247
_RS04660
Position (kb) 594
595
596 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1 at 593.517 kb on - strand, within SGL_RS04645 at 593.562 kb on + strand, within SGL_RS04645 at 593.619 kb on + strand, within SGL_RS04645 at 594.006 kb on - strand, within SGL_RS04645 at 594.172 kb on + strand at 594.179 kb on + strand at 594.191 kb on + strand at 594.233 kb on - strand at 594.485 kb on - strand at 594.585 kb on - strand, within SGL_RS04650 at 594.631 kb on - strand, within SGL_RS04650 at 594.694 kb on + strand, within SGL_RS04650 at 594.696 kb on - strand, within SGL_RS04650 at 594.804 kb on - strand, within SGL_RS04650 at 594.996 kb on - strand, within SGL_RS04650 at 595.006 kb on - strand, within SGL_RS04650 at 595.041 kb on - strand, within SGL_RS04650 at 595.123 kb on + strand, within SGL_RS04650 at 595.154 kb on - strand, within SGL_RS04650 at 595.189 kb on + strand, within SGL_RS04650 at 595.198 kb on - strand, within SGL_RS04650 at 595.220 kb on - strand, within SGL_RS04650 at 595.258 kb on + strand, within SGL_RS04650 at 595.267 kb on - strand, within SGL_RS04650 at 595.312 kb on - strand, within SGL_RS04650 at 595.321 kb on - strand, within SGL_RS04650 at 595.454 kb on + strand, within SGL_RS04650 at 595.524 kb on + strand, within SGL_RS04650 at 595.524 kb on + strand, within SGL_RS04650 at 595.594 kb on + strand at 595.664 kb on + strand at 596.489 kb on + strand at 596.509 kb on - strand at 596.570 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 3 uM remove 593,517 - SGL_RS04645 0.26 -0.1 593,562 + SGL_RS04645 0.31 -0.3 593,619 + SGL_RS04645 0.37 -2.9 594,006 - SGL_RS04645 0.76 -0.4 594,172 + +0.0 594,179 + +0.7 594,191 + -0.2 594,233 - -0.5 594,485 - +0.6 594,585 - SGL_RS04650 0.11 -4.7 594,631 - SGL_RS04650 0.15 -5.3 594,694 + SGL_RS04650 0.20 -2.6 594,696 - SGL_RS04650 0.20 -6.5 594,804 - SGL_RS04650 0.29 -6.9 594,996 - SGL_RS04650 0.45 -5.3 595,006 - SGL_RS04650 0.46 -5.5 595,041 - SGL_RS04650 0.49 -5.5 595,123 + SGL_RS04650 0.56 -6.1 595,154 - SGL_RS04650 0.58 -5.3 595,189 + SGL_RS04650 0.61 -2.9 595,198 - SGL_RS04650 0.62 -4.9 595,220 - SGL_RS04650 0.64 -6.1 595,258 + SGL_RS04650 0.67 -6.0 595,267 - SGL_RS04650 0.68 -5.8 595,312 - SGL_RS04650 0.72 -5.0 595,321 - SGL_RS04650 0.72 -6.4 595,454 + SGL_RS04650 0.84 -4.2 595,524 + SGL_RS04650 0.89 -3.0 595,524 + SGL_RS04650 0.89 -5.9 595,594 + -5.2 595,664 + +0.2 596,489 + +0.1 596,509 - +0.1 596,570 + +0.4
Or see this region's nucleotide sequence