Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02280 and SGL_RS02285 are separated by 83 nucleotides SGL_RS02285 and SGL_RS02290 are separated by 9 nucleotides SGL_RS02290 and SGL_RS02295 are separated by 96 nucleotides
SGL_RS02280: SGL_RS02280 - Rne/Rng family ribonuclease, at 93,128 to 95,152
_RS02280
SGL_RS02285: SGL_RS02285 - ribonuclease HII, at 95,236 to 95,808
_RS02285
SGL_RS02290: SGL_RS02290 - 8-oxo-dGTP diphosphatase MutT, at 95,818 to 96,228
_RS02290
SGL_RS02295: SGL_RS02295 - polyribonucleotide nucleotidyltransferase, at 96,325 to 98,481
_RS02295
Position (kb) 95
96
97 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1 at 94.859 kb on + strand, within SGL_RS02280 at 94.881 kb on - strand, within SGL_RS02280 at 94.907 kb on - strand, within SGL_RS02280 at 94.926 kb on - strand, within SGL_RS02280 at 95.153 kb on + strand at 95.339 kb on + strand, within SGL_RS02285 at 95.346 kb on + strand, within SGL_RS02285 at 95.380 kb on + strand, within SGL_RS02285 at 95.385 kb on + strand, within SGL_RS02285 at 95.397 kb on + strand, within SGL_RS02285 at 95.405 kb on - strand, within SGL_RS02285 at 95.407 kb on + strand, within SGL_RS02285 at 95.407 kb on + strand, within SGL_RS02285 at 95.413 kb on + strand, within SGL_RS02285 at 95.452 kb on - strand, within SGL_RS02285 at 95.462 kb on - strand, within SGL_RS02285 at 95.464 kb on + strand, within SGL_RS02285 at 95.473 kb on + strand, within SGL_RS02285 at 95.556 kb on - strand, within SGL_RS02285 at 95.697 kb on - strand, within SGL_RS02285 at 95.707 kb on - strand, within SGL_RS02285 at 95.753 kb on - strand at 95.766 kb on - strand at 95.937 kb on - strand, within SGL_RS02290 at 95.938 kb on - strand, within SGL_RS02290 at 95.975 kb on + strand, within SGL_RS02290 at 96.000 kb on + strand, within SGL_RS02290 at 96.008 kb on - strand, within SGL_RS02290 at 96.010 kb on + strand, within SGL_RS02290 at 96.078 kb on - strand, within SGL_RS02290 at 96.091 kb on - strand, within SGL_RS02290 at 96.224 kb on + strand at 96.310 kb on + strand at 96.322 kb on + strand at 96.347 kb on - strand at 96.349 kb on + strand at 97.219 kb on + strand, within SGL_RS02295
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 3 uM remove 94,859 + SGL_RS02280 0.85 -4.9 94,881 - SGL_RS02280 0.87 -4.2 94,907 - SGL_RS02280 0.88 -6.8 94,926 - SGL_RS02280 0.89 -2.9 95,153 + -0.6 95,339 + SGL_RS02285 0.18 -0.5 95,346 + SGL_RS02285 0.19 -0.0 95,380 + SGL_RS02285 0.25 -0.5 95,385 + SGL_RS02285 0.26 +0.1 95,397 + SGL_RS02285 0.28 +0.3 95,405 - SGL_RS02285 0.29 +0.1 95,407 + SGL_RS02285 0.30 +0.1 95,407 + SGL_RS02285 0.30 +0.5 95,413 + SGL_RS02285 0.31 +0.2 95,452 - SGL_RS02285 0.38 +0.2 95,462 - SGL_RS02285 0.39 -0.3 95,464 + SGL_RS02285 0.40 +0.2 95,473 + SGL_RS02285 0.41 +0.0 95,556 - SGL_RS02285 0.56 +0.3 95,697 - SGL_RS02285 0.80 +0.4 95,707 - SGL_RS02285 0.82 +0.0 95,753 - +0.1 95,766 - -0.9 95,937 - SGL_RS02290 0.29 -0.1 95,938 - SGL_RS02290 0.29 -0.5 95,975 + SGL_RS02290 0.38 -0.3 96,000 + SGL_RS02290 0.44 -0.5 96,008 - SGL_RS02290 0.46 +0.7 96,010 + SGL_RS02290 0.47 -0.2 96,078 - SGL_RS02290 0.63 -0.4 96,091 - SGL_RS02290 0.66 -0.5 96,224 + -0.4 96,310 + -0.4 96,322 + -0.4 96,347 - +0.4 96,349 + +0.8 97,219 + SGL_RS02295 0.41 +0.4
Or see this region's nucleotide sequence