Experiment: Nickel (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02015 and SGL_RS02020 are separated by 141 nucleotides SGL_RS02020 and SGL_RS02025 are separated by 180 nucleotides
SGL_RS02015: SGL_RS02015 - ABC transporter ATP-binding protein, at 36,757 to 38,538
_RS02015
SGL_RS02020: SGL_RS02020 - AraC family transcriptional regulator, at 38,680 to 39,636
_RS02020
SGL_RS02025: SGL_RS02025 - TonB-dependent receptor, at 39,817 to 42,363
_RS02025
Position (kb) 38
39
40 Strain fitness (log2 ratio) -1
0
1 at 37.693 kb on + strand, within SGL_RS02015 at 37.704 kb on + strand, within SGL_RS02015 at 37.863 kb on - strand, within SGL_RS02015 at 37.891 kb on + strand, within SGL_RS02015 at 38.029 kb on - strand, within SGL_RS02015 at 38.144 kb on + strand, within SGL_RS02015 at 38.152 kb on - strand, within SGL_RS02015 at 38.235 kb on - strand, within SGL_RS02015 at 38.291 kb on + strand, within SGL_RS02015 at 38.391 kb on + strand at 38.399 kb on + strand at 38.462 kb on + strand at 38.467 kb on + strand at 38.528 kb on + strand at 38.528 kb on + strand at 38.818 kb on + strand, within SGL_RS02020 at 38.865 kb on + strand, within SGL_RS02020 at 38.911 kb on - strand, within SGL_RS02020 at 39.057 kb on - strand, within SGL_RS02020 at 39.180 kb on + strand, within SGL_RS02020 at 39.235 kb on + strand, within SGL_RS02020 at 39.235 kb on + strand, within SGL_RS02020 at 39.250 kb on - strand, within SGL_RS02020 at 39.859 kb on - strand at 39.891 kb on + strand at 39.912 kb on - strand at 39.939 kb on + strand at 39.946 kb on - strand at 39.981 kb on - strand at 40.015 kb on + strand at 40.058 kb on + strand at 40.164 kb on - strand, within SGL_RS02025 at 40.221 kb on - strand, within SGL_RS02025 at 40.351 kb on + strand, within SGL_RS02025 at 40.370 kb on + strand, within SGL_RS02025 at 40.409 kb on + strand, within SGL_RS02025 at 40.409 kb on - strand, within SGL_RS02025 at 40.415 kb on - strand, within SGL_RS02025 at 40.443 kb on + strand, within SGL_RS02025 at 40.497 kb on + strand, within SGL_RS02025 at 40.519 kb on - strand, within SGL_RS02025 at 40.545 kb on + strand, within SGL_RS02025 at 40.562 kb on + strand, within SGL_RS02025 at 40.630 kb on + strand, within SGL_RS02025 at 40.630 kb on + strand, within SGL_RS02025
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) sulfate 3 uM remove 37,693 + SGL_RS02015 0.53 +0.5 37,704 + SGL_RS02015 0.53 -0.2 37,863 - SGL_RS02015 0.62 -0.1 37,891 + SGL_RS02015 0.64 -1.1 38,029 - SGL_RS02015 0.71 +0.1 38,144 + SGL_RS02015 0.78 +0.2 38,152 - SGL_RS02015 0.78 +0.2 38,235 - SGL_RS02015 0.83 +0.3 38,291 + SGL_RS02015 0.86 -0.0 38,391 + +0.8 38,399 + +0.0 38,462 + -0.1 38,467 + +0.4 38,528 + +0.5 38,528 + -0.1 38,818 + SGL_RS02020 0.14 +1.5 38,865 + SGL_RS02020 0.19 +0.0 38,911 - SGL_RS02020 0.24 -0.6 39,057 - SGL_RS02020 0.39 +0.7 39,180 + SGL_RS02020 0.52 -0.1 39,235 + SGL_RS02020 0.58 +0.1 39,235 + SGL_RS02020 0.58 +1.3 39,250 - SGL_RS02020 0.60 +0.4 39,859 - +0.2 39,891 + +0.0 39,912 - +0.5 39,939 + +0.1 39,946 - +0.5 39,981 - -0.1 40,015 + +0.0 40,058 + -0.2 40,164 - SGL_RS02025 0.14 -0.1 40,221 - SGL_RS02025 0.16 +0.4 40,351 + SGL_RS02025 0.21 +0.3 40,370 + SGL_RS02025 0.22 -0.4 40,409 + SGL_RS02025 0.23 +0.3 40,409 - SGL_RS02025 0.23 +0.8 40,415 - SGL_RS02025 0.23 +0.2 40,443 + SGL_RS02025 0.25 +0.1 40,497 + SGL_RS02025 0.27 +0.1 40,519 - SGL_RS02025 0.28 -0.0 40,545 + SGL_RS02025 0.29 +0.7 40,562 + SGL_RS02025 0.29 +0.1 40,630 + SGL_RS02025 0.32 +0.1 40,630 + SGL_RS02025 0.32 +0.3
Or see this region's nucleotide sequence