Experiment: Bathocuproine disulfonic 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14155 and SGL_RS14160 are separated by 342 nucleotides SGL_RS14160 and SGL_RS14165 are separated by 4 nucleotides SGL_RS14165 and SGL_RS14170 are separated by 1 nucleotides
SGL_RS14155: SGL_RS14155 - cation:proton antiporter, at 2,632,124 to 2,633,509
_RS14155
SGL_RS14160: SGL_RS14160 - anti-sigma factor, at 2,633,852 to 2,634,655
_RS14160
SGL_RS14165: SGL_RS14165 - sigma-70 family RNA polymerase sigma factor, at 2,634,660 to 2,635,217
_RS14165
SGL_RS14170: SGL_RS14170 - cytochrome c biogenesis protein CcdA, at 2,635,219 to 2,636,046
_RS14170
Position (kb)
2633
2634
2635 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2633.535 kb on + strand at 2633.576 kb on + strand at 2633.718 kb on - strand at 2633.764 kb on - strand at 2634.127 kb on + strand, within SGL_RS14160 at 2634.127 kb on + strand, within SGL_RS14160 at 2634.235 kb on - strand, within SGL_RS14160 at 2634.367 kb on - strand, within SGL_RS14160 at 2634.462 kb on - strand, within SGL_RS14160 at 2634.485 kb on - strand, within SGL_RS14160 at 2634.510 kb on - strand, within SGL_RS14160 at 2634.571 kb on - strand, within SGL_RS14160 at 2634.648 kb on - strand at 2634.781 kb on - strand, within SGL_RS14165 at 2634.833 kb on - strand, within SGL_RS14165 at 2634.927 kb on - strand, within SGL_RS14165 at 2634.945 kb on + strand, within SGL_RS14165 at 2635.013 kb on + strand, within SGL_RS14165 at 2635.020 kb on + strand, within SGL_RS14165 at 2635.234 kb on - strand at 2635.360 kb on + strand, within SGL_RS14170 at 2635.386 kb on - strand, within SGL_RS14170
Per-strain Table
Position Strand Gene LocusTag Fraction Bathocuproine disulfonic 0.3 mM remove 2,633,535 + -4.3 2,633,576 + -0.4 2,633,718 - -0.1 2,633,764 - -0.1 2,634,127 + SGL_RS14160 0.34 -1.3 2,634,127 + SGL_RS14160 0.34 -0.2 2,634,235 - SGL_RS14160 0.48 -1.0 2,634,367 - SGL_RS14160 0.64 -0.9 2,634,462 - SGL_RS14160 0.76 -0.4 2,634,485 - SGL_RS14160 0.79 -0.2 2,634,510 - SGL_RS14160 0.82 -2.4 2,634,571 - SGL_RS14160 0.89 -1.7 2,634,648 - -2.6 2,634,781 - SGL_RS14165 0.22 -0.4 2,634,833 - SGL_RS14165 0.31 -0.4 2,634,927 - SGL_RS14165 0.48 -0.2 2,634,945 + SGL_RS14165 0.51 -0.1 2,635,013 + SGL_RS14165 0.63 +0.0 2,635,020 + SGL_RS14165 0.65 -0.3 2,635,234 - +0.3 2,635,360 + SGL_RS14170 0.17 +0.4 2,635,386 - SGL_RS14170 0.20 -0.1
Or see this region's nucleotide sequence