Experiment: Copper (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06810 and SGL_RS06815 are separated by 200 nucleotides SGL_RS06815 and SGL_RS06820 are separated by 26 nucleotides SGL_RS06820 and SGL_RS06825 are separated by 5 nucleotides SGL_RS06825 and SGL_RS06830 are separated by 20 nucleotides
SGL_RS06810: SGL_RS06810 - 1,4-dihydroxy-2-naphthoyl-CoA synthase, at 1,052,927 to 1,053,754
_RS06810
SGL_RS06815: SGL_RS06815 - Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha, at 1,053,955 to 1,055,547
_RS06815
SGL_RS06820: SGL_RS06820 - hypothetical protein, at 1,055,574 to 1,056,113
_RS06820
SGL_RS06825: SGL_RS06825 - nucleotidyltransferase family protein, at 1,056,119 to 1,056,466
_RS06825
SGL_RS06830: SGL_RS06830 - type II toxin-antitoxin system HicA family toxin, at 1,056,487 to 1,056,717
_RS06830
Position (kb)
1053
1054
1055
1056 Strain fitness (log2 ratio)
-1
0
1 at 1053.093 kb on - strand, within SGL_RS06810 at 1053.492 kb on + strand, within SGL_RS06810 at 1053.794 kb on - strand at 1053.796 kb on + strand at 1053.804 kb on + strand at 1053.804 kb on - strand at 1053.804 kb on - strand at 1053.852 kb on - strand at 1053.882 kb on + strand at 1054.067 kb on - strand at 1054.371 kb on + strand, within SGL_RS06815 at 1054.488 kb on - strand, within SGL_RS06815 at 1054.497 kb on + strand, within SGL_RS06815 at 1054.574 kb on + strand, within SGL_RS06815 at 1054.575 kb on - strand, within SGL_RS06815 at 1054.771 kb on + strand, within SGL_RS06815 at 1054.855 kb on + strand, within SGL_RS06815 at 1054.886 kb on - strand, within SGL_RS06815 at 1055.164 kb on - strand, within SGL_RS06815 at 1055.168 kb on + strand, within SGL_RS06815 at 1055.168 kb on + strand, within SGL_RS06815 at 1055.260 kb on + strand, within SGL_RS06815 at 1055.313 kb on - strand, within SGL_RS06815 at 1055.353 kb on + strand, within SGL_RS06815 at 1055.358 kb on + strand, within SGL_RS06815 at 1055.365 kb on + strand, within SGL_RS06815 at 1055.974 kb on + strand, within SGL_RS06820
Per-strain Table
Position Strand Gene LocusTag Fraction Copper (II) sulfate 5 uM remove 1,053,093 - SGL_RS06810 0.20 -1.6 1,053,492 + SGL_RS06810 0.68 -0.6 1,053,794 - +0.3 1,053,796 + +0.2 1,053,804 + +0.2 1,053,804 - -0.3 1,053,804 - -0.4 1,053,852 - -0.3 1,053,882 + +0.1 1,054,067 - +1.1 1,054,371 + SGL_RS06815 0.26 +0.5 1,054,488 - SGL_RS06815 0.33 +0.7 1,054,497 + SGL_RS06815 0.34 -0.4 1,054,574 + SGL_RS06815 0.39 +1.1 1,054,575 - SGL_RS06815 0.39 +0.8 1,054,771 + SGL_RS06815 0.51 +0.7 1,054,855 + SGL_RS06815 0.56 +0.6 1,054,886 - SGL_RS06815 0.58 +0.6 1,055,164 - SGL_RS06815 0.76 +0.5 1,055,168 + SGL_RS06815 0.76 +0.4 1,055,168 + SGL_RS06815 0.76 -0.2 1,055,260 + SGL_RS06815 0.82 +0.7 1,055,313 - SGL_RS06815 0.85 +0.5 1,055,353 + SGL_RS06815 0.88 +0.3 1,055,358 + SGL_RS06815 0.88 -1.0 1,055,365 + SGL_RS06815 0.89 +1.1 1,055,974 + SGL_RS06820 0.74 +1.0
Or see this region's nucleotide sequence