Experiment: Copper (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03225 and SGL_RS03230 are separated by 85 nucleotides SGL_RS03230 and SGL_RS03235 are separated by 217 nucleotides
SGL_RS03225: SGL_RS03225 - NAD(P)H-quinone oxidoreductase subunit 4, at 286,164 to 287,843
_RS03225
SGL_RS03230: SGL_RS03230 - MFS transporter, at 287,929 to 289,104
_RS03230
SGL_RS03235: SGL_RS03235 - C-3',4' desaturase CrtD, at 289,322 to 290,845
_RS03235
Position (kb) 287
288
289
290 Strain fitness (log2 ratio) -1
0
1 at 287.060 kb on - strand, within SGL_RS03225 at 287.065 kb on - strand, within SGL_RS03225 at 287.087 kb on - strand, within SGL_RS03225 at 287.087 kb on - strand, within SGL_RS03225 at 287.187 kb on - strand, within SGL_RS03225 at 287.219 kb on - strand, within SGL_RS03225 at 287.224 kb on + strand, within SGL_RS03225 at 287.229 kb on + strand, within SGL_RS03225 at 287.472 kb on - strand, within SGL_RS03225 at 287.515 kb on + strand, within SGL_RS03225 at 287.533 kb on - strand, within SGL_RS03225 at 287.627 kb on + strand, within SGL_RS03225 at 287.659 kb on + strand, within SGL_RS03225 at 287.728 kb on - strand at 287.779 kb on - strand at 287.784 kb on + strand at 287.784 kb on + strand at 287.791 kb on - strand at 288.040 kb on + strand at 288.126 kb on - strand, within SGL_RS03230 at 288.162 kb on - strand, within SGL_RS03230 at 288.317 kb on + strand, within SGL_RS03230 at 288.405 kb on + strand, within SGL_RS03230 at 288.555 kb on + strand, within SGL_RS03230 at 288.563 kb on - strand, within SGL_RS03230 at 288.683 kb on - strand, within SGL_RS03230 at 288.743 kb on + strand, within SGL_RS03230 at 288.757 kb on - strand, within SGL_RS03230 at 288.763 kb on + strand, within SGL_RS03230 at 288.926 kb on - strand, within SGL_RS03230 at 288.989 kb on + strand at 289.030 kb on - strand at 289.045 kb on + strand at 289.053 kb on - strand at 289.093 kb on + strand at 289.411 kb on + strand at 289.456 kb on - strand at 289.538 kb on - strand, within SGL_RS03235 at 289.583 kb on + strand, within SGL_RS03235 at 289.592 kb on + strand, within SGL_RS03235 at 289.829 kb on - strand, within SGL_RS03235 at 289.924 kb on + strand, within SGL_RS03235 at 289.947 kb on + strand, within SGL_RS03235 at 289.966 kb on + strand, within SGL_RS03235 at 289.969 kb on - strand, within SGL_RS03235 at 289.974 kb on + strand, within SGL_RS03235 at 290.017 kb on - strand, within SGL_RS03235 at 290.040 kb on + strand, within SGL_RS03235 at 290.048 kb on - strand, within SGL_RS03235
Per-strain Table
Position Strand Gene LocusTag Fraction Copper (II) sulfate 5 uM remove 287,060 - SGL_RS03225 0.53 +0.8 287,065 - SGL_RS03225 0.54 +0.7 287,087 - SGL_RS03225 0.55 +0.5 287,087 - SGL_RS03225 0.55 +0.5 287,187 - SGL_RS03225 0.61 +0.9 287,219 - SGL_RS03225 0.63 +0.2 287,224 + SGL_RS03225 0.63 +0.1 287,229 + SGL_RS03225 0.63 +0.0 287,472 - SGL_RS03225 0.78 +0.6 287,515 + SGL_RS03225 0.80 +0.3 287,533 - SGL_RS03225 0.81 +0.2 287,627 + SGL_RS03225 0.87 -0.2 287,659 + SGL_RS03225 0.89 +0.4 287,728 - +0.1 287,779 - +0.0 287,784 + +0.5 287,784 + +0.3 287,791 - +0.2 288,040 + +0.3 288,126 - SGL_RS03230 0.17 -0.1 288,162 - SGL_RS03230 0.20 +0.3 288,317 + SGL_RS03230 0.33 +0.1 288,405 + SGL_RS03230 0.40 +0.1 288,555 + SGL_RS03230 0.53 +0.4 288,563 - SGL_RS03230 0.54 +0.4 288,683 - SGL_RS03230 0.64 +0.1 288,743 + SGL_RS03230 0.69 +0.3 288,757 - SGL_RS03230 0.70 +0.5 288,763 + SGL_RS03230 0.71 +0.2 288,926 - SGL_RS03230 0.85 +0.9 288,989 + -0.4 289,030 - -0.0 289,045 + -0.0 289,053 - -0.2 289,093 + -0.0 289,411 + +0.4 289,456 - -0.3 289,538 - SGL_RS03235 0.14 +0.1 289,583 + SGL_RS03235 0.17 -0.3 289,592 + SGL_RS03235 0.18 +0.5 289,829 - SGL_RS03235 0.33 +0.2 289,924 + SGL_RS03235 0.40 +0.3 289,947 + SGL_RS03235 0.41 +0.7 289,966 + SGL_RS03235 0.42 -0.9 289,969 - SGL_RS03235 0.42 +0.1 289,974 + SGL_RS03235 0.43 +0.4 290,017 - SGL_RS03235 0.46 +1.3 290,040 + SGL_RS03235 0.47 -0.1 290,048 - SGL_RS03235 0.48 +0.1
Or see this region's nucleotide sequence