Experiment: Copper (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02910 and SGL_RS02915 are separated by 90 nucleotides SGL_RS02915 and SGL_RS19550 are separated by 564 nucleotides SGL_RS19550 and SGL_RS02920 are separated by 24 nucleotides
SGL_RS02910: SGL_RS02910 - linear amide C-N hydrolase, at 223,742 to 224,806
_RS02910
SGL_RS02915: SGL_RS02915 - TM0106 family RecB-like putative nuclease, at 224,897 to 226,363
_RS02915
SGL_RS19550: SGL_RS19550 - hypothetical protein, at 226,928 to 227,098
_RS19550
SGL_RS02920: SGL_RS02920 - DUF2092 domain-containing protein, at 227,123 to 227,899
_RS02920
Position (kb) 224
225
226
227 Strain fitness (log2 ratio) -1
0
1 at 223.986 kb on + strand, within SGL_RS02910 at 223.989 kb on - strand, within SGL_RS02910 at 223.994 kb on - strand, within SGL_RS02910 at 224.038 kb on - strand, within SGL_RS02910 at 224.155 kb on - strand, within SGL_RS02910 at 224.166 kb on - strand, within SGL_RS02910 at 224.314 kb on + strand, within SGL_RS02910 at 224.337 kb on + strand, within SGL_RS02910 at 224.486 kb on - strand, within SGL_RS02910 at 224.706 kb on - strand at 225.058 kb on - strand, within SGL_RS02915 at 225.125 kb on - strand, within SGL_RS02915 at 225.454 kb on - strand, within SGL_RS02915 at 225.642 kb on - strand, within SGL_RS02915 at 225.716 kb on - strand, within SGL_RS02915 at 225.724 kb on - strand, within SGL_RS02915 at 225.771 kb on + strand, within SGL_RS02915 at 225.893 kb on - strand, within SGL_RS02915 at 225.898 kb on - strand, within SGL_RS02915 at 225.976 kb on + strand, within SGL_RS02915 at 226.196 kb on - strand, within SGL_RS02915 at 226.282 kb on + strand at 226.376 kb on + strand at 226.406 kb on + strand at 226.533 kb on + strand at 226.619 kb on + strand at 226.716 kb on + strand at 226.738 kb on + strand at 226.863 kb on - strand at 226.918 kb on - strand at 227.001 kb on - strand, within SGL_RS19550 at 227.038 kb on + strand, within SGL_RS19550 at 227.256 kb on + strand, within SGL_RS02920
Per-strain Table
Position Strand Gene LocusTag Fraction Copper (II) sulfate 5 uM remove 223,986 + SGL_RS02910 0.23 +0.5 223,989 - SGL_RS02910 0.23 +0.5 223,994 - SGL_RS02910 0.24 +0.0 224,038 - SGL_RS02910 0.28 +0.1 224,155 - SGL_RS02910 0.39 +0.1 224,166 - SGL_RS02910 0.40 +0.1 224,314 + SGL_RS02910 0.54 -0.2 224,337 + SGL_RS02910 0.56 +0.3 224,486 - SGL_RS02910 0.70 +0.1 224,706 - +0.2 225,058 - SGL_RS02915 0.11 -0.6 225,125 - SGL_RS02915 0.16 +0.9 225,454 - SGL_RS02915 0.38 +0.8 225,642 - SGL_RS02915 0.51 +0.8 225,716 - SGL_RS02915 0.56 +0.4 225,724 - SGL_RS02915 0.56 +1.3 225,771 + SGL_RS02915 0.60 +0.4 225,893 - SGL_RS02915 0.68 +0.4 225,898 - SGL_RS02915 0.68 +0.9 225,976 + SGL_RS02915 0.74 +1.5 226,196 - SGL_RS02915 0.89 +0.1 226,282 + +0.8 226,376 + +1.7 226,406 + +0.7 226,533 + +0.2 226,619 + +0.5 226,716 + -1.0 226,738 + -0.2 226,863 - +1.0 226,918 - -0.0 227,001 - SGL_RS19550 0.43 +0.3 227,038 + SGL_RS19550 0.64 +0.3 227,256 + SGL_RS02920 0.17 -0.0
Or see this region's nucleotide sequence