Experiment: Copper (II) sulfate 5 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02145 and SGL_RS02150 are separated by 72 nucleotides SGL_RS02150 and SGL_RS02155 are separated by 38 nucleotides SGL_RS02155 and SGL_RS02160 are separated by 224 nucleotides
SGL_RS02145: SGL_RS02145 - metallophosphoesterase, at 65,827 to 67,533
_RS02145
SGL_RS02150: SGL_RS02150 - WecB/TagA/CpsF family glycosyltransferase, at 67,606 to 68,361
_RS02150
SGL_RS02155: SGL_RS02155 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB, at 68,400 to 69,059
_RS02155
SGL_RS02160: SGL_RS02160 - GDSL-type esterase/lipase family protein, at 69,284 to 69,985
_RS02160
Position (kb) 67
68
69 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 66.671 kb on - strand, within SGL_RS02145 at 66.752 kb on - strand, within SGL_RS02145 at 66.757 kb on - strand, within SGL_RS02145 at 66.785 kb on + strand, within SGL_RS02145 at 66.785 kb on + strand, within SGL_RS02145 at 66.829 kb on - strand, within SGL_RS02145 at 66.835 kb on + strand, within SGL_RS02145 at 66.877 kb on - strand, within SGL_RS02145 at 66.972 kb on - strand, within SGL_RS02145 at 66.999 kb on + strand, within SGL_RS02145 at 67.043 kb on - strand, within SGL_RS02145 at 67.087 kb on - strand, within SGL_RS02145 at 67.163 kb on - strand, within SGL_RS02145 at 67.166 kb on + strand, within SGL_RS02145 at 67.200 kb on - strand, within SGL_RS02145 at 67.260 kb on - strand, within SGL_RS02145 at 67.322 kb on + strand, within SGL_RS02145 at 67.330 kb on - strand, within SGL_RS02145 at 67.330 kb on - strand, within SGL_RS02145 at 67.330 kb on - strand, within SGL_RS02145 at 67.399 kb on + strand at 67.399 kb on + strand at 67.406 kb on + strand at 67.463 kb on - strand at 67.657 kb on + strand at 67.660 kb on - strand at 67.786 kb on + strand, within SGL_RS02150 at 67.794 kb on - strand, within SGL_RS02150 at 67.823 kb on + strand, within SGL_RS02150 at 67.838 kb on + strand, within SGL_RS02150 at 67.850 kb on + strand, within SGL_RS02150 at 68.167 kb on + strand, within SGL_RS02150 at 68.528 kb on + strand, within SGL_RS02155 at 68.600 kb on + strand, within SGL_RS02155 at 68.720 kb on - strand, within SGL_RS02155 at 68.790 kb on - strand, within SGL_RS02155 at 68.879 kb on - strand, within SGL_RS02155 at 68.975 kb on - strand, within SGL_RS02155 at 68.988 kb on - strand, within SGL_RS02155 at 69.173 kb on + strand at 69.355 kb on - strand, within SGL_RS02160
Per-strain Table
Position Strand Gene LocusTag Fraction Copper (II) sulfate 5 uM remove 66,671 - SGL_RS02145 0.49 -4.3 66,752 - SGL_RS02145 0.54 -2.7 66,757 - SGL_RS02145 0.54 -2.8 66,785 + SGL_RS02145 0.56 -2.9 66,785 + SGL_RS02145 0.56 -5.1 66,829 - SGL_RS02145 0.59 -3.9 66,835 + SGL_RS02145 0.59 -3.4 66,877 - SGL_RS02145 0.62 -3.4 66,972 - SGL_RS02145 0.67 -2.6 66,999 + SGL_RS02145 0.69 -3.7 67,043 - SGL_RS02145 0.71 -2.7 67,087 - SGL_RS02145 0.74 -5.5 67,163 - SGL_RS02145 0.78 -2.9 67,166 + SGL_RS02145 0.78 -2.4 67,200 - SGL_RS02145 0.80 -1.9 67,260 - SGL_RS02145 0.84 -1.9 67,322 + SGL_RS02145 0.88 -3.2 67,330 - SGL_RS02145 0.88 -5.5 67,330 - SGL_RS02145 0.88 -4.2 67,330 - SGL_RS02145 0.88 -4.2 67,399 + -3.0 67,399 + -1.4 67,406 + -2.5 67,463 - -3.5 67,657 + +1.8 67,660 - +2.4 67,786 + SGL_RS02150 0.24 +1.6 67,794 - SGL_RS02150 0.25 +1.7 67,823 + SGL_RS02150 0.29 +1.6 67,838 + SGL_RS02150 0.31 +1.7 67,850 + SGL_RS02150 0.32 +1.8 68,167 + SGL_RS02150 0.74 +1.7 68,528 + SGL_RS02155 0.19 +0.8 68,600 + SGL_RS02155 0.30 +0.4 68,720 - SGL_RS02155 0.48 +0.7 68,790 - SGL_RS02155 0.59 +0.8 68,879 - SGL_RS02155 0.73 +0.2 68,975 - SGL_RS02155 0.87 +1.6 68,988 - SGL_RS02155 0.89 +0.4 69,173 + +0.4 69,355 - SGL_RS02160 0.10 +0.4
Or see this region's nucleotide sequence