Experiment: Copper (II) sulfate 3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS01900 and SGL_RS01905 are separated by 144 nucleotides SGL_RS01905 and SGL_RS01910 are separated by 606 nucleotides
SGL_RS01900: SGL_RS01900 - GDP-L-fucose synthase, at 4,451 to 5,389
_RS01900
SGL_RS01905: SGL_RS01905 - GDP-mannose 4,6-dehydratase, at 5,534 to 6,622
_RS01905
SGL_RS01910: SGL_RS01910 - photosystem II q(b) protein, at 7,229 to 8,311
_RS01910
Position (kb) 5
6
7 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 4.628 kb on + strand, within SGL_RS01900 at 4.682 kb on - strand, within SGL_RS01900 at 4.878 kb on - strand, within SGL_RS01900 at 4.916 kb on + strand, within SGL_RS01900 at 5.037 kb on - strand, within SGL_RS01900 at 5.178 kb on - strand, within SGL_RS01900 at 5.178 kb on - strand, within SGL_RS01900 at 5.198 kb on + strand, within SGL_RS01900 at 5.237 kb on + strand, within SGL_RS01900 at 5.571 kb on + strand at 5.760 kb on - strand, within SGL_RS01905 at 5.873 kb on + strand, within SGL_RS01905 at 5.917 kb on + strand, within SGL_RS01905 at 5.918 kb on - strand, within SGL_RS01905 at 5.936 kb on - strand, within SGL_RS01905 at 6.026 kb on + strand, within SGL_RS01905 at 6.026 kb on + strand, within SGL_RS01905 at 6.119 kb on + strand, within SGL_RS01905 at 6.132 kb on + strand, within SGL_RS01905 at 6.137 kb on + strand, within SGL_RS01905 at 6.145 kb on - strand, within SGL_RS01905 at 6.145 kb on - strand, within SGL_RS01905 at 6.246 kb on + strand, within SGL_RS01905 at 6.355 kb on - strand, within SGL_RS01905 at 6.411 kb on - strand, within SGL_RS01905 at 6.414 kb on - strand, within SGL_RS01905 at 6.416 kb on - strand, within SGL_RS01905 at 6.429 kb on + strand, within SGL_RS01905 at 6.495 kb on + strand, within SGL_RS01905 at 6.495 kb on + strand, within SGL_RS01905 at 6.614 kb on - strand at 6.685 kb on + strand at 6.823 kb on + strand at 6.823 kb on + strand at 6.823 kb on + strand at 6.831 kb on - strand at 6.984 kb on - strand at 7.054 kb on + strand at 7.062 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Copper (II) sulfate 3 uM remove 4,628 + SGL_RS01900 0.19 -1.3 4,682 - SGL_RS01900 0.25 -1.5 4,878 - SGL_RS01900 0.45 -0.7 4,916 + SGL_RS01900 0.50 -0.9 5,037 - SGL_RS01900 0.62 -0.7 5,178 - SGL_RS01900 0.77 -1.2 5,178 - SGL_RS01900 0.77 -1.4 5,198 + SGL_RS01900 0.80 -2.8 5,237 + SGL_RS01900 0.84 -1.5 5,571 + -1.8 5,760 - SGL_RS01905 0.21 -4.3 5,873 + SGL_RS01905 0.31 -2.3 5,917 + SGL_RS01905 0.35 -4.2 5,918 - SGL_RS01905 0.35 -2.8 5,936 - SGL_RS01905 0.37 -3.0 6,026 + SGL_RS01905 0.45 -2.4 6,026 + SGL_RS01905 0.45 -3.4 6,119 + SGL_RS01905 0.54 -4.5 6,132 + SGL_RS01905 0.55 -4.1 6,137 + SGL_RS01905 0.55 -3.6 6,145 - SGL_RS01905 0.56 -3.5 6,145 - SGL_RS01905 0.56 -2.5 6,246 + SGL_RS01905 0.65 -2.8 6,355 - SGL_RS01905 0.75 -2.0 6,411 - SGL_RS01905 0.81 -3.6 6,414 - SGL_RS01905 0.81 -2.3 6,416 - SGL_RS01905 0.81 -2.3 6,429 + SGL_RS01905 0.82 -4.0 6,495 + SGL_RS01905 0.88 -3.0 6,495 + SGL_RS01905 0.88 -2.0 6,614 - -2.7 6,685 + +0.2 6,823 + +0.2 6,823 + -0.5 6,823 + +0.4 6,831 - +0.4 6,984 - -0.1 7,054 + -0.2 7,062 - +0.1
Or see this region's nucleotide sequence