Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14895 and SGL_RS14900 overlap by 4 nucleotides SGL_RS14900 and SGL_RS14905 are separated by 65 nucleotides SGL_RS14905 and SGL_RS14910 are separated by 202 nucleotides
SGL_RS14895: SGL_RS14895 - DUF2811 domain-containing protein, at 2,797,198 to 2,797,425
_RS14895
SGL_RS14900: SGL_RS14900 - aminoacyl-tRNA hydrolase, at 2,797,422 to 2,798,006
_RS14900
SGL_RS14905: SGL_RS14905 - 30S ribosomal protein PSRP-3, at 2,798,072 to 2,798,410
_RS14905
SGL_RS14910: SGL_RS14910 - Tic22 family chloroplast protein importer, at 2,798,613 to 2,799,473
_RS14910
Position (kb)
2798
2799 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2797.160 kb on + strand at 2797.281 kb on - strand, within SGL_RS14895 at 2797.309 kb on + strand, within SGL_RS14895 at 2797.323 kb on - strand, within SGL_RS14895 at 2797.492 kb on - strand, within SGL_RS14900 at 2797.550 kb on - strand, within SGL_RS14900 at 2797.672 kb on - strand, within SGL_RS14900 at 2797.967 kb on + strand at 2798.080 kb on + strand at 2798.133 kb on - strand, within SGL_RS14905 at 2798.178 kb on + strand, within SGL_RS14905 at 2798.280 kb on + strand, within SGL_RS14905 at 2798.309 kb on + strand, within SGL_RS14905 at 2798.583 kb on + strand at 2798.591 kb on - strand at 2799.139 kb on - strand, within SGL_RS14910 at 2799.314 kb on - strand, within SGL_RS14910 at 2799.320 kb on + strand, within SGL_RS14910
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,797,160 + +0.3 2,797,281 - SGL_RS14895 0.36 +0.4 2,797,309 + SGL_RS14895 0.49 +0.2 2,797,323 - SGL_RS14895 0.55 +0.2 2,797,492 - SGL_RS14900 0.12 -0.0 2,797,550 - SGL_RS14900 0.22 -2.4 2,797,672 - SGL_RS14900 0.43 -3.2 2,797,967 + +0.4 2,798,080 + -3.3 2,798,133 - SGL_RS14905 0.18 -1.5 2,798,178 + SGL_RS14905 0.31 -2.3 2,798,280 + SGL_RS14905 0.61 -1.7 2,798,309 + SGL_RS14905 0.70 -1.5 2,798,583 + +0.3 2,798,591 - -2.5 2,799,139 - SGL_RS14910 0.61 -2.1 2,799,314 - SGL_RS14910 0.81 -2.6 2,799,320 + SGL_RS14910 0.82 -1.0
Or see this region's nucleotide sequence