Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03260 and SGL_RS03265 are separated by 149 nucleotides SGL_RS03265 and SGL_RS03270 are separated by 194 nucleotides SGL_RS03270 and SGL_RS20110 are separated by 245 nucleotides
SGL_RS03260: SGL_RS03260 - FUSC family protein, at 295,076 to 297,343
_RS03260
SGL_RS03265: SGL_RS03265 - photosystem II complex extrinsic protein PsbU, at 297,493 to 297,888
_RS03265
SGL_RS03270: SGL_RS03270 - HNH endonuclease, at 298,083 to 298,580
_RS03270
SGL_RS20110: SGL_RS20110 - hypothetical protein, at 298,826 to 298,957
_RS20110
Position (kb) 297
298 Strain fitness (log2 ratio) -2
-1
0
1 at 296.549 kb on - strand, within SGL_RS03260 at 296.711 kb on + strand, within SGL_RS03260 at 296.719 kb on - strand, within SGL_RS03260 at 296.719 kb on - strand, within SGL_RS03260 at 296.881 kb on + strand, within SGL_RS03260 at 297.288 kb on - strand at 297.780 kb on - strand, within SGL_RS03265 at 297.906 kb on - strand at 298.312 kb on - strand, within SGL_RS03270 at 298.386 kb on + strand, within SGL_RS03270 at 298.495 kb on + strand, within SGL_RS03270 at 298.536 kb on + strand at 298.870 kb on + strand, within SGL_RS20110
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 296,549 - SGL_RS03260 0.65 -0.1 296,711 + SGL_RS03260 0.72 -0.1 296,719 - SGL_RS03260 0.72 +0.1 296,719 - SGL_RS03260 0.72 +0.2 296,881 + SGL_RS03260 0.80 -0.1 297,288 - +0.0 297,780 - SGL_RS03265 0.72 -1.5 297,906 - -1.8 298,312 - SGL_RS03270 0.46 -0.0 298,386 + SGL_RS03270 0.61 +0.7 298,495 + SGL_RS03270 0.83 +0.2 298,536 + +0.8 298,870 + SGL_RS20110 0.33 -0.0
Or see this region's nucleotide sequence