Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03225 and SGL_RS03230 are separated by 85 nucleotides SGL_RS03230 and SGL_RS03235 are separated by 217 nucleotides
SGL_RS03225: SGL_RS03225 - NAD(P)H-quinone oxidoreductase subunit 4, at 286,164 to 287,843
_RS03225
SGL_RS03230: SGL_RS03230 - MFS transporter, at 287,929 to 289,104
_RS03230
SGL_RS03235: SGL_RS03235 - C-3',4' desaturase CrtD, at 289,322 to 290,845
_RS03235
Position (kb) 287
288
289
290 Strain fitness (log2 ratio) -1
0
1 at 287.060 kb on - strand, within SGL_RS03225 at 287.065 kb on - strand, within SGL_RS03225 at 287.087 kb on - strand, within SGL_RS03225 at 287.087 kb on - strand, within SGL_RS03225 at 287.187 kb on - strand, within SGL_RS03225 at 287.219 kb on - strand, within SGL_RS03225 at 287.224 kb on + strand, within SGL_RS03225 at 287.229 kb on + strand, within SGL_RS03225 at 287.472 kb on - strand, within SGL_RS03225 at 287.515 kb on + strand, within SGL_RS03225 at 287.533 kb on - strand, within SGL_RS03225 at 287.627 kb on + strand, within SGL_RS03225 at 287.659 kb on + strand, within SGL_RS03225 at 287.728 kb on - strand at 287.779 kb on - strand at 287.784 kb on + strand at 287.784 kb on + strand at 287.791 kb on - strand at 288.040 kb on + strand at 288.126 kb on - strand, within SGL_RS03230 at 288.162 kb on - strand, within SGL_RS03230 at 288.317 kb on + strand, within SGL_RS03230 at 288.405 kb on + strand, within SGL_RS03230 at 288.555 kb on + strand, within SGL_RS03230 at 288.563 kb on - strand, within SGL_RS03230 at 288.683 kb on - strand, within SGL_RS03230 at 288.743 kb on + strand, within SGL_RS03230 at 288.757 kb on - strand, within SGL_RS03230 at 288.763 kb on + strand, within SGL_RS03230 at 288.926 kb on - strand, within SGL_RS03230 at 288.989 kb on + strand at 289.030 kb on - strand at 289.045 kb on + strand at 289.053 kb on - strand at 289.093 kb on + strand at 289.411 kb on + strand at 289.456 kb on - strand at 289.538 kb on - strand, within SGL_RS03235 at 289.583 kb on + strand, within SGL_RS03235 at 289.592 kb on + strand, within SGL_RS03235 at 289.829 kb on - strand, within SGL_RS03235 at 289.924 kb on + strand, within SGL_RS03235 at 289.947 kb on + strand, within SGL_RS03235 at 289.966 kb on + strand, within SGL_RS03235 at 289.969 kb on - strand, within SGL_RS03235 at 289.974 kb on + strand, within SGL_RS03235 at 290.017 kb on - strand, within SGL_RS03235 at 290.040 kb on + strand, within SGL_RS03235 at 290.048 kb on - strand, within SGL_RS03235
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 287,060 - SGL_RS03225 0.53 +0.4 287,065 - SGL_RS03225 0.54 +0.3 287,087 - SGL_RS03225 0.55 -0.2 287,087 - SGL_RS03225 0.55 +0.3 287,187 - SGL_RS03225 0.61 +0.7 287,219 - SGL_RS03225 0.63 +0.2 287,224 + SGL_RS03225 0.63 -0.7 287,229 + SGL_RS03225 0.63 -0.0 287,472 - SGL_RS03225 0.78 +0.1 287,515 + SGL_RS03225 0.80 +0.0 287,533 - SGL_RS03225 0.81 +0.2 287,627 + SGL_RS03225 0.87 -0.4 287,659 + SGL_RS03225 0.89 +0.4 287,728 - +0.1 287,779 - -0.0 287,784 + +0.1 287,784 + +0.5 287,791 - +0.2 288,040 + -0.0 288,126 - SGL_RS03230 0.17 -0.8 288,162 - SGL_RS03230 0.20 +0.0 288,317 + SGL_RS03230 0.33 +0.1 288,405 + SGL_RS03230 0.40 +0.2 288,555 + SGL_RS03230 0.53 +0.1 288,563 - SGL_RS03230 0.54 +0.3 288,683 - SGL_RS03230 0.64 -0.2 288,743 + SGL_RS03230 0.69 +0.2 288,757 - SGL_RS03230 0.70 +0.8 288,763 + SGL_RS03230 0.71 +0.7 288,926 - SGL_RS03230 0.85 +0.5 288,989 + -0.1 289,030 - +0.2 289,045 + -0.6 289,053 - -0.3 289,093 + -0.2 289,411 + +0.2 289,456 - -0.5 289,538 - SGL_RS03235 0.14 -0.1 289,583 + SGL_RS03235 0.17 -0.4 289,592 + SGL_RS03235 0.18 +0.8 289,829 - SGL_RS03235 0.33 +0.3 289,924 + SGL_RS03235 0.40 -0.1 289,947 + SGL_RS03235 0.41 +0.8 289,966 + SGL_RS03235 0.42 -0.1 289,969 - SGL_RS03235 0.42 +0.2 289,974 + SGL_RS03235 0.43 -1.6 290,017 - SGL_RS03235 0.46 +1.2 290,040 + SGL_RS03235 0.47 -0.2 290,048 - SGL_RS03235 0.48 +0.2
Or see this region's nucleotide sequence